| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0558 |
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| Symbol | |
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| ID | 7271974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 551392 |
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| End bp | 553017 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643569205 |
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| Product | nitrogenase molybdenum-iron protein alpha chain |
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| Protein accession | YP_002465654 |
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| Protein GI | 219851222 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000289733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.238141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAA CTGAAGAACA ACTGGAGGAG ATGCTCAGTC GTTACCCGGA CAAGGTCAAA
AAGAACCGGA AGAAGCATCT CATCCTGAAG AACTCAGCCG AGGCCTGTCA GCAGATCGAG
GCGAACACCC GGACGATCCC GGGCATCATC TCCCAGCGTG GTTGTGCCTA TGCCGGCTGC
AAAGGTGTGG TCGTCGGACC GATCAAGGAC ATGGTACATA TCGTCCATGG TCCAGTCGGC
TGCTCATATT ACGCCTGGGG AACCCGGCGA AACAAAGCAC GGGCTGATGA CACGACTCCT
CCAGAGAAGG TCTTCACTCC CCTCTGCTTC ACCACCGATA TGCAGGAGAG CGACATCGTC
TTCGGCGGGG ACAAGAAACT GGCCAAGATG ATCGACCAGG TTGTCGAGAT CTTCCATCCA
CGGGCGGTCT CGATCTGCGC CACCTGTCCA GTCGGTCTGA TCGGTGATGA TATCAATGCA
GTGGCGAAGG CCGCTGAAGA GCGGCACGGG ATCCAGGTCC TCTCGTTCAA CTGCGAAGGG
TATAAAGGGG TCAGCCAGTC GGCAGGACAC CATATAGCGA ACAACAATCT GATGGAGCAT
GTGATCGGAA AGGGAACCGC CGAAAAGAAC CCGGACGATT ATGTGATCAA CATCCTCGGG
GAGTACAACA TCGGAGGGGA TGGATGGGAA CTGGAACGGA TCCTAAAGGA TATCGGCTAC
ACCCTGAACT GCATCATGAC AGGGGACGCC AGTTATGAGA AGATCCGGAA TCTGCACATT
GCCGACCTGA ATCTGGTTCA GTGCCACCGT TCGATCAACT ACATCGCCGA GATGATGGAG
ACCAAGTATG GTATCCCATG GCTGAAGGTC AACTTCATCG GGGTCACCGC CACCATGGCC
TCGCTCCGCG AGATCGCCCA GTGCTTCAAT GATGAAAAAC TGATCGAACG AACCGAGATG
GTGATCGCCA GGGAACTGGC TCGGGTGACC CCCGCATTGG AACAGTACCG GAAGATCTGC
CAGGGAAAGA CTGCATTCAT CTTTGTCGGA GGGTCCAGGA GTCACCATTA CCAGGCCCTT
CTCCGAGACC TGGGTATGGA CGTGGTGGTC GCAGGTTACG AGTTTGCCCA CCGCGATGAC
TATGAGGGAC GGCAAGTGAT CCCAACCATC AAGAGCGACG CCGACTCCAA GAACATTCCG
GAACTCCATC CAACCCCAGA CGAGGAGTTA TACCAGGAGG CACATGTCCA CCTGAAGATG
TCAAAGGAGA AGTACGACGA ACTATCCAGC AGGATTGCCT TCAACAGTTA CCAGGGGATG
ATCCCTGAGA TGAAGGACGG AGAGGTGATC CTGGATGACG CCAACCATCA CGAGGTCGAA
GAACTGATCA GGATGATAAA ACCGGATCTC TTCTTCTCAG GAGTCAGGGA CAAGTATATC
GTTCACAAGA TGGGTGTCCC GGCGAAACAG ATGCACTCGT ATGACTACAG CGGCCCTTAT
GCCGGCTTCA ACGGTTCCCT GATCTTCGCC GAGGACGTGG CGAACGCGCT GGTGACCCCG
GCCTGGAAAC TGGTAACGGC ACCATGGGAA GACCAAAACA GATCAAGGAG TGATAGCAAT
GCTTGA
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| Protein sequence | MSITEEQLEE MLSRYPDKVK KNRKKHLILK NSAEACQQIE ANTRTIPGII SQRGCAYAGC
KGVVVGPIKD MVHIVHGPVG CSYYAWGTRR NKARADDTTP PEKVFTPLCF TTDMQESDIV
FGGDKKLAKM IDQVVEIFHP RAVSICATCP VGLIGDDINA VAKAAEERHG IQVLSFNCEG
YKGVSQSAGH HIANNNLMEH VIGKGTAEKN PDDYVINILG EYNIGGDGWE LERILKDIGY
TLNCIMTGDA SYEKIRNLHI ADLNLVQCHR SINYIAEMME TKYGIPWLKV NFIGVTATMA
SLREIAQCFN DEKLIERTEM VIARELARVT PALEQYRKIC QGKTAFIFVG GSRSHHYQAL
LRDLGMDVVV AGYEFAHRDD YEGRQVIPTI KSDADSKNIP ELHPTPDEEL YQEAHVHLKM
SKEKYDELSS RIAFNSYQGM IPEMKDGEVI LDDANHHEVE ELIRMIKPDL FFSGVRDKYI
VHKMGVPAKQ MHSYDYSGPY AGFNGSLIFA EDVANALVTP AWKLVTAPWE DQNRSRSDSN
A
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