| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0556 |
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| Symbol | |
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| ID | 7271972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 548610 |
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| End bp | 549998 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569203 |
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| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
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| Protein accession | YP_002465652 |
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| Protein GI | 219851220 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.263807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.366302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA CAGGCGTACT GGACGTTGGG TCTGGTGCAT GTATCGATGA ACGGCAGCGA
TCGATCATAA CCACCGGGAG AAATAAGAGC AGTATCCACT GCTCTGACGA TAGCATGGCC
GGCTCAGTCA GCCAGCGGGC CTGCGTCTTC TGTGGAGCAC GGGTGGTACT GAACCCGGTA
ACGGACGCGA TTCACCTGGT CCACGGTCCG ATCGGCTGTG CCACGTACAC TATGGACATC
CGGGGGAGCC TCTCCAGCGG GTCAGAACTG TATCGAAACA GTTTCTCCAC CGATCTCAAA
GAGAAGGATG TCGTCTTTGG CGGAGAGAAG AAACTCGCCG CCTGCATCGA TGAGGTCGTT
ACCAAGTATC ATCCTCCGGC AGTGTTCGTG TACTCGACCT GCGTGGTTGG GATGATCGGC
GACGATATCA TCGCTGTCTG CAAGGCTGCC TCAGCGCGGC ACCAGATCGA TGTGATCCCG
GTGGAGTCCA CCGGGTTCAT GTCTGGGAAC AAGGTGATCG GCTACCGGGC AGCGGCTGAA
GCACTGCTGA AACTGATCAC CCCCAAAGAA GGGGAGACCG TCCAGATGAC CAGGAAGCTG
AACTTCCTTG GAGAATACAA TCTGGGCGGG GAGAAATGGC TCGTCGAACG CTATCTCAGA
GAGATCGGGA TCGAGATCAA CGTGGCCTTC ACCGGGGACT CTACAGTGGC CGCCCTGAAG
CAGGCACCAG GGGCATGCCT GAATATTGTG CAGTGCACCG GGTCCATGCA CTGGGTGGCT
CAGAACCTGG AACGGACATT CGGTACCCCT TATATCGATG TGAACTTCTT CGGCGCAGAG
AATACGGCAG AGAGCCTGCG AAAGATCGCC GAATTCTATG AGGACGAGGA GATCATGCGC
AGGACCGAGG TCCTGATCGA TCGGGAGATG AAGAATATCC AGCCAGCGAT CCAGAAGTAT
CGGGAGAAAC TGACCGGAAA ACGTGCGGCC ATCTATGTGG GCGGCGCCTT CAAAGCGGTG
GCCATCATCC GCCAGTTGCA GGAACTGGGG ATGGAGGTGG TCTTCACCGG GACGCAGACC
GGCAAACAGG AGGAGTACGA CCGGATCCGT GATATGGTAG ACGAAGGGAC GGTCATCATC
GACGACGCCA ATCCGGCAGA GCTTGAGAAG TTCCTGCTGG AGAAGGAGGT CGACATGATG
GCTGGCGGTG TGAAGGAACG GGTACTCGCC TTTAAACTGG GGATCGGCTT CGTCGATCAC
AACCATGACC GGAAGGAATG CCTGGCCGGC TTCGAAGGAG CCGTCCGGTT CGCGAGAGAG
GTATACATCA CCACCTGCTC CCCAGTCTGG AAGCACCTGA AACAGACTCC CCCTTGTAAG
GAGGACTGA
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| Protein sequence | MEETGVLDVG SGACIDERQR SIITTGRNKS SIHCSDDSMA GSVSQRACVF CGARVVLNPV
TDAIHLVHGP IGCATYTMDI RGSLSSGSEL YRNSFSTDLK EKDVVFGGEK KLAACIDEVV
TKYHPPAVFV YSTCVVGMIG DDIIAVCKAA SARHQIDVIP VESTGFMSGN KVIGYRAAAE
ALLKLITPKE GETVQMTRKL NFLGEYNLGG EKWLVERYLR EIGIEINVAF TGDSTVAALK
QAPGACLNIV QCTGSMHWVA QNLERTFGTP YIDVNFFGAE NTAESLRKIA EFYEDEEIMR
RTEVLIDREM KNIQPAIQKY REKLTGKRAA IYVGGAFKAV AIIRQLQELG MEVVFTGTQT
GKQEEYDRIR DMVDEGTVII DDANPAELEK FLLEKEVDMM AGGVKERVLA FKLGIGFVDH
NHDRKECLAG FEGAVRFARE VYITTCSPVW KHLKQTPPCK ED
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