Gene Mpal_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0552 
Symbol 
ID7271968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp545258 
End bp546115 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID643569199 
Product8-oxoguanine DNA glycosylase domain protein 
Protein accessionYP_002465648 
Protein GI219851216 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID[TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.729182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.316005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACA CGCTGAACCT GTCGTCTGAT CAGTCTTTCT CTCTCTCGCT GACGCTGGGG 
TGCGGGCAGG CCTTCCGGTG GGAGCAGGAC GAAGCCGGAT GGTGGGAAGG GGTCGTCGGG
GATGAGGTGA TCCGGGTCCG CCAGGAAGAT CGGTCGCTGA CCTTCACCGG AACCAGTGAA
GAACGCCTGA TCGAGTACTT CGCCCTGGAC ATGGATCTCG CACATGTGCT GGAGACGATC
GATCGAGATC CGTTCATCCA TGCGGCGATT GAGGAGTGTG CTGGCCTTCG GATCCTCAGG
CAGCCCTCCT GGGAGTGCCT CCTCTCCTAC CTCTGCGCGA CCAATACCAA CATTCCAATG
GTGAAGAAAC GGGTCCGTCT CCTCGCCGAG AGCCTGGGGG AACGGATCCC CGGCACTGAC
CAGTTCGCCT TTCCTGTACC ATCCGTCTTC AACGAAACCT GTGCCGAACC ACTCGACCAT
TGTAGACTGG GGTACCGGAA AGGGTATCTC GCCACGACGG CGTGCCAGCT CGCTGCTGAG
GGGGGATGGG AGGGACGGGT CCGGGCTCAA CCATTCGAGG AGGCACGACA GGTACTGACC
AGGCTTCCTG GTATCGGACC TAAGGCAGCC GACTGTGTCC TCCTCTTTGG TTTTTCGCGG
TACGAGGCGT TCCCGGTCGA TGTCTGGATC CGGCGAATCA TGCAGCAGTT CTACCCTGAA
ACTGCTGCAG AGGGATCGTT CACCCCCAAA GAATACGAGC GGATTCGGCG GTTTGCCTGG
GAATATTTTG GTGAATATGC CGGCTATGCC CAGGAATACC TCTACGGAGC CCGGATGGGA
GCAGCCCAGA TCCCCTGA
 
Protein sequence
MAHTLNLSSD QSFSLSLTLG CGQAFRWEQD EAGWWEGVVG DEVIRVRQED RSLTFTGTSE 
ERLIEYFALD MDLAHVLETI DRDPFIHAAI EECAGLRILR QPSWECLLSY LCATNTNIPM
VKKRVRLLAE SLGERIPGTD QFAFPVPSVF NETCAEPLDH CRLGYRKGYL ATTACQLAAE
GGWEGRVRAQ PFEEARQVLT RLPGIGPKAA DCVLLFGFSR YEAFPVDVWI RRIMQQFYPE
TAAEGSFTPK EYERIRRFAW EYFGEYAGYA QEYLYGARMG AAQIP