| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0547 |
|---|
| Symbol | |
|---|
| ID | 7271963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 542711 |
|---|
| End bp | 543001 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643569194 |
|---|
| Product | 50S ribosomal protein L21e |
|---|
| Protein accession | YP_002465643 |
|---|
| Protein GI | 219851211 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2139] Ribosomal protein L21E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.017602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.303699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATC ATAACGGCCC ACGAAAGAAG ACACGGTATA AGTTCAAGAA GGATCTCCGC
AAGCGCGGTA TCGTCCCAGT GACATCCCTG ATTCAGCACT TCGAGATTGG ACAGAGTGTA
CACATCGTCT GTGAGCCAAG CATCCAGAAG GGGATGCCCC ACCGCCGGTT CCATGGAAAG
ACCGGTAAGG TGATCGGCCA GCGCGGAAGG GCCTGGATGC TCACGATCTT CGATGGCAAC
ATGGAGAAGA TTGTGATTGC AAGACCGCAA CATCTAAAAG CTCAAAAATA A
|
|---|
| Protein sequence | MAHHNGPRKK TRYKFKKDLR KRGIVPVTSL IQHFEIGQSV HIVCEPSIQK GMPHRRFHGK
TGKVIGQRGR AWMLTIFDGN MEKIVIARPQ HLKAQK
|
|---|
| |