Gene Mpal_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0545 
Symbol 
ID7271961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp540904 
End bp541479 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content58% 
IMG OID643569192 
Producthypothetical protein 
Protein accessionYP_002465641 
Protein GI219851209 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0274885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT TTGTTATCAT AGGCCACCGG GCCACGACAA GTGGAACCTT CAGTCTGAAC 
GATATGCCCG GGGCGGCCGG ACGTATGGAC ATCCTCTGTA GATGTGTGAA CACTACGTTC
TTTCTCTCGC ATGATCTGCG CAGGGATACT GTCTGTTACC TGATCCTCTC CGGAGGACCG
GATCCTGAGA AGACGGTTCG ATTCACCGGT GAGACGGTCA GGTACCTGAA CCCGGACGAA
CGATCTGCCG GGTCCCTGAT CAAGAAGGCC CTGGCCCACA CCTGCACCGA CCGGTTTACC
GAGTCGACCC GGGGGGTCGA GGTGCGGTGG GGCGGGCTTG CACGTCTGCT CGAGGATGTC
CCCTGTGCGG TCCTGGACGA ACATGGCGAG GACATCAGGA CAGCACCTGC CCTCCCCTCC
GGATTTCTGC TCAGTGACCA TCAGAACTTC ACTGATGAGG AACTGCACCT GATCAGTTCA
CTTCCCCGGT ATTCGGTTGG ACCGAAATGC CTGCATGCAG ATCACACCAT AACGGTGGTG
CTGAATGAAC TCGATCGACG TGAGGCGAAC CAGTGA
 
Protein sequence
MTSFVIIGHR ATTSGTFSLN DMPGAAGRMD ILCRCVNTTF FLSHDLRRDT VCYLILSGGP 
DPEKTVRFTG ETVRYLNPDE RSAGSLIKKA LAHTCTDRFT ESTRGVEVRW GGLARLLEDV
PCAVLDEHGE DIRTAPALPS GFLLSDHQNF TDEELHLISS LPRYSVGPKC LHADHTITVV
LNELDRREAN Q