Gene Mpal_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0526 
Symbolndk 
ID7271942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp529205 
End bp529654 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content59% 
IMG OID643569173 
Productnucleoside diphosphate kinase 
Protein accessionYP_002465622 
Protein GI219851190 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.535144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGA CCTTTGTGAT GATCAAGCCC GATGGAGTCC AGCGCGGCTT AATCGGGCAG 
ATCGTCGCCC GGCTTGAGGA CAAGGGGCTG AAGATGGTGG CCGCACGATT TGAGCGGCTC
GCTGAGGCGA CGGTGAATGA ACACTACCGT GAGCACATCG AACGGTCGTT CTATCCCTCG
CTCAAGCAGT ATATCATGAG CGGTCCCTGT TTCCTGATGG TCTGGGAGGG AAAGAATGCG
GCTGCGGTGG TCAGAACGCT GACCGGCGCA ACCAACCCAT CCGAGGCCGC TCCTGGCACT
ATCAGGGGCG ATTACGGTCT TGACATCGGT AGGAATGTGA TCCATGCGTC CGACGCTCCT
GAGAGCGCCG CACGCGAGAT TGCACTTCAC TTCCCGGGCA CCGGACAGGT CACCTATACA
CGGATCGATG AACCGGTCCT GTATGAGTGA
 
Protein sequence
MDRTFVMIKP DGVQRGLIGQ IVARLEDKGL KMVAARFERL AEATVNEHYR EHIERSFYPS 
LKQYIMSGPC FLMVWEGKNA AAVVRTLTGA TNPSEAAPGT IRGDYGLDIG RNVIHASDAP
ESAAREIALH FPGTGQVTYT RIDEPVLYE