Gene Mpal_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0520 
Symbol 
ID7271936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp524463 
End bp525179 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID643569167 
Productglycosyl transferase family 2 
Protein accessionYP_002465616 
Protein GI219851184 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.877558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TTGAGGTCAG CGCGGTGATA CCGGTCTATA ACGACCTCCC CGCACTAAAG 
GTTGCGATCC CTGTATCGAT CGAGGTTCTC TCCAAGGTCA CCGATAGTTT TGAGATCCTG
GTAGCAGAGG ACGGTTCCAC CGATGGGAGT GCTGAGTTCG TCAGGGCCGT CGAGCAGACC
GATCCCCGTA TTCACCTGCT CCATTCAGAT CAGCGTCTTG GACGGGGCAG GGCCCTGAAC
CGTGCGTTCA CTGCCGCCCA GGGGACGATC GTCTGCTACT ATGATGTCGA CCTGGCTACC
GACATGCAGC ACCTCGCCGA GGTGATCGAT GCGGTCCGTG AGGGCTCTGA TATTGCGACT
GGTTCGCGTC TTCTCCCGGA GAGCGACATC GTCAGGACTG GCGGGCGGGA GATCGCGAGC
CGGGGGTATA ACCTGCTGGT CAGGACGATC CTCGGTTCAA AACTGTACGA CCACCAGTGC
GGGTTCAAGG CCTTCAACAG AGCTCGGCTT CTGCCGTTGC TCGAAAAGGT TGATGATACG
CACTGGTTCT GGGACACCGA GGTACTGGTC CGGGGGGCCC GGGCCGGCTA TAGGATCCGG
GAGATACCGG TTCGGTGGCG GCAGGGGCCG GGGACCACGG TCAAAAGGAA GGACGTCGTG
GACATGGGCA GTGCGATCCT GCGGTTGTGG TGGGGGCTTC ATGTATCGAA AGATTAG
 
Protein sequence
MTSIEVSAVI PVYNDLPALK VAIPVSIEVL SKVTDSFEIL VAEDGSTDGS AEFVRAVEQT 
DPRIHLLHSD QRLGRGRALN RAFTAAQGTI VCYYDVDLAT DMQHLAEVID AVREGSDIAT
GSRLLPESDI VRTGGREIAS RGYNLLVRTI LGSKLYDHQC GFKAFNRARL LPLLEKVDDT
HWFWDTEVLV RGARAGYRIR EIPVRWRQGP GTTVKRKDVV DMGSAILRLW WGLHVSKD