| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0510 |
|---|
| Symbol | |
|---|
| ID | 7271926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 514101 |
|---|
| End bp | 515339 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643569157 |
|---|
| Product | UbiD family decarboxylase |
|---|
| Protein accession | YP_002465606 |
|---|
| Protein GI | 219851174 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAT TTATTGAAAA GATGCGAGCT GCAGGGCGTC TGACCGAGGT CAGCAGTCCC
TGCTCCACAG AGTACGAGGC CCCGAAGCGG GCTGCAGCGA CCGATGATCT GGTCCTCTTC
GAGGATCTCG ACGGGATGCG GGGGGTGATG AACCTGGTTG CGACCCGTTC GGCCCTGGCT
CTGGCCCTCG ATATAAGGGA GGAGTCGCTG GTGTCGATGC TGGCTGGATG CCGGTTTGAC
GGTGAGGTGG CGGTGGATGG GAAGGTGACC ACCGGCCACC CCGACCTCTC AAGGATCCCG
ATTATGAAGC ACTATCCTCT GGACGCAGGA CGATACCTCA CATCAGCGAT CGTCTTCTCC
CGGTATGGCG GGGTTCAGAA CGGTTCGATC CATCGGATGC AAATGCTGGA TAAGACCCAT
CTCGCGGCCC GGCTGGTCGA AGGACGGCAT ACGTATAACC TGCATAAGGC GGCGCTGGCC
GATGGAGAAA ACCTGCCGGT GGCCATCACC ATCGGGACAC ATCCGGCTGT CACGTTCGCC
TCCTGTACGC GGGTCCCGGA GGGGAAGGAA CTCGCCTATG CCGCCGAACT GCGGGGCGGA
ATGCTCCCGG TTCGAGAGTG CAGTAACGGG GTGCTCGTCC CCGACGCAGA GATCGTACTT
GAGGGATACA TCGGGGCCGA GACCGCAGAG GAGGGGCCGT TCGTCGATAT CACCGGAACC
TATGACCCGA TCAGGATCCA GCCGGTGATC ACGATCACCG GGATGCAGAT GAAGCGGGAC
CCAATCTACC ATGGGATCCT GCCAGGTGGT GCCGAGCACA AGATGCTGAT GGGCGCTCCG
TACGAGCCGA AGATCTATAC GGCGGTGAGC GGGGTCACCG GCGTTAAAAA TGTGGTACTG
ACCAGCGGTG GGTGCGGGTA CCTCCACGCG GTTGTTCAGA TCAAAAAGCG GACGCAGGGA
GACGCGAAGA ATGCCATCAT GGCCGCGTTT GCTGCTCATA CTTCGTTGAA GCATGTGGTC
GTCGTCGACG AGGACATCGA TCCGACCTCG CTCACCGAGG TGGAGTATGC GATCGCGACG
CGGGTACGAG GCGACGAGGA CTTGATGGTG ATCACTGGCG TCCGCGGTTC GTCCCTGGAC
CCCTGCCGGC TGGCGGATGG GACCAATGTG AAGGTCGGGG TCGACGCGAC GATGGTGATG
GGACGTGAGG ACGAGTTTGT CCGGGCACGG TGGGATTGA
|
|---|
| Protein sequence | MREFIEKMRA AGRLTEVSSP CSTEYEAPKR AAATDDLVLF EDLDGMRGVM NLVATRSALA
LALDIREESL VSMLAGCRFD GEVAVDGKVT TGHPDLSRIP IMKHYPLDAG RYLTSAIVFS
RYGGVQNGSI HRMQMLDKTH LAARLVEGRH TYNLHKAALA DGENLPVAIT IGTHPAVTFA
SCTRVPEGKE LAYAAELRGG MLPVRECSNG VLVPDAEIVL EGYIGAETAE EGPFVDITGT
YDPIRIQPVI TITGMQMKRD PIYHGILPGG AEHKMLMGAP YEPKIYTAVS GVTGVKNVVL
TSGGCGYLHA VVQIKKRTQG DAKNAIMAAF AAHTSLKHVV VVDEDIDPTS LTEVEYAIAT
RVRGDEDLMV ITGVRGSSLD PCRLADGTNV KVGVDATMVM GREDEFVRAR WD
|
|---|
| |