| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0507 |
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| Symbol | |
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| ID | 7271923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 511886 |
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| End bp | 513046 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569154 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_002465603 |
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| Protein GI | 219851171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.56018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA CCATTATCAA TAGCGTTAAT GCAGGCAGTG AACTCAATTA TCAGATTGAG
CTTCAGCAGA TAGAGGCTCA GTTCCTCGAG CTGAAGATGA GGTTCGACAC TCTCCAGAAA
GAGAACGCTC ATCTCAAGAA GGAGAACAAT CAGCTGAAGC GTATGCCACT CTTTGTGGCT
GTGGTCGTGG ACATGCTCGG GGATGGTGTG ATCTATCTCC GGCAGCAGGG GAATAATCAG
GAGTACCTGA CCCATATTGA CGAGGATCTG TATCGTACCT TAAAACCAGG AACCAAAGTC
GCAGTGAACA ACTCTCTCTC TGTAGTCAGG GTCGTCGGCA ACATCTTTGA TGCACGGATC
AGGGTGATGG AACTGGACTC CTCGCCTGAT GTCTCCTTCG ACCAGATCGG CGGACTTGCA
GAGCAGATCG AGGAGGTGCG AGAGGCCGTC GAGTACCCGT TGACCAGGCC TGAAATATTC
CTGCAGGTGG GTGTCGAACC GCCGAAGGGG ATCCTGCTCC ATGGTTCGCC AGGAACCGGC
AAGACCCTGA TCGCAAAGGC GGTCGCCCAT GAAGCGAAGG CCACCTTCAT CCGGATGTCC
GGGAGCGAAC TGGTTCACAA GTTCATCGGT GAAGGCGCCC AACTGGTCAG GGAACTCTTC
ACGCTCGCTC GTGAGAGGGC TCCCTCGATC ATCTTCATCG ATGAGATCGA CGCGGTCGGT
TCGATCAGGA CCAACGACGG GACCTCGGGA AGTGCCGAGG TGCAGCGGAC CATGATGCAG
TTGCTGGCAG AGATGGATGG GTTCAACAAC AGGGGAGATG TCCGGATCAT GGCTGCGACG
AACCGGGTGG ACATGCTCGA CCCGGCTCTG TTACGCCCCG GGCGGTTCGA CCGGGTGATC
GAGATACCGC TGCCGGACAA GGGCTCGCGT CGGTCGATCC TCTCGATTCA TTCCAGGAAT
ATGACACTCT CCAACGTTGA TATCGACCTG CTCGCGGAGA TGACCGAGAC CTTCACCGGT
GCGGAGCTGC AGTCCGTCTG CAGGGAGGCT GGAATGATGG CAGTTAGAAA GAAAGCTTCA
GCCATCGAAC AGCAGGACTT CATCGCTGCG ATCAGAAAGA TCAGGACAGA TCCCGCCACC
GACGAGCGCA TGTTCACCTG A
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| Protein sequence | MDDTIINSVN AGSELNYQIE LQQIEAQFLE LKMRFDTLQK ENAHLKKENN QLKRMPLFVA
VVVDMLGDGV IYLRQQGNNQ EYLTHIDEDL YRTLKPGTKV AVNNSLSVVR VVGNIFDARI
RVMELDSSPD VSFDQIGGLA EQIEEVREAV EYPLTRPEIF LQVGVEPPKG ILLHGSPGTG
KTLIAKAVAH EAKATFIRMS GSELVHKFIG EGAQLVRELF TLARERAPSI IFIDEIDAVG
SIRTNDGTSG SAEVQRTMMQ LLAEMDGFNN RGDVRIMAAT NRVDMLDPAL LRPGRFDRVI
EIPLPDKGSR RSILSIHSRN MTLSNVDIDL LAEMTETFTG AELQSVCREA GMMAVRKKAS
AIEQQDFIAA IRKIRTDPAT DERMFT
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