Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0488 |
Symbol | |
ID | 7271903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 490493 |
End bp | 495892 |
Gene Length | 5400 bp |
Protein Length | 1799 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643569135 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_002465585 |
Protein GI | 219851153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC CTGGAACAGT GCAAATACTC ATAGCTCTGC TCCTGCTCCT CTGTCTGATC GAGGGTGCCG CCGCGGTCAC CGTGGTGGTG GCAGCGCAGG ACAGCAGTGC GCTCTCCAAA ACATCGGCCC AGTTTATCTG TACCGGATCA GGCGACCAGG ACCAGATCAA GGCAGCGATC GCATCCCTTC CCTGGGATGG GGGGACCGTG TTACTGAAGG AAGGAACCTA TCACTGCACC GACAATATCG TGCCCGGAGC CTATACCACC CTCAAAGGGG AAGGGGTCGA TAAGACGATC ATCGACATCC AGGGATATTA TATGGGTATC AAAGTCGACC AGCCCTACGT CACGCTGGAG GACTTCACCA TCACCGGCCG CGGATGGGTC AGGATCACCG CCAGCCACAT ACAGGTCAGA AACGTCGCCG CAAAGGATGA CCTGCTTGGC TACTATCCAG GCAAAGTCGA TGATATGGGG GCGAACGGGG CATTTTTTGT CTGGGCTGAC AACAGAGTCG TCGAGGATAT CGAGTTCAAC CAGTGCAGCG CCACCAACAT CGGCACCCAT GGGTTCAATC TGAACGGCCA GGGGACCCCA AAGATGATCA AGAACATCCG GTTCATCGAC TGTTCGGCGA CCCAGTGCGG GAACGCCGAG GGATGGCCCT GGGCGACAGG GTTCGACTTC CATGAGAGTA ACGACCTGGT CGACTGCCAG GTCATACGCT GTGTAGCAAA CAACAACTGG GAATCAGGGT TCCACTTCGA GCCAGGCGAC AACCAGCAGA ACATCGTGTT GACTGACTGC CTCAGCACCA ACAATGGGCA GCGGAACACC AATGAGGGGG ATTTCACAGT ACAACCCCCT GTAGCTGCAC ACTTCTATAT GGCAGGGTAC ACGATCGCGA TGGGGACCAC GTTGAACAAC TGCCGTTCGA TCAATAACAG GAACTATGGG TTTTATGACG AGCAGAACGG GGACAACGTC TTCAACGGAT GTACTGACGA GGGAAGCGGG TACGGCTGGA AACTCTGTAA GGACGTCGAA GATGTCCAGT TGAACAACTG TACCTCGGTA GATGCCCAAA ACTGGGCCCT CTGGATCGCC TATGCACATA ACATTCAGGT CAGAGGATTC CAGCAGTACA GTGCGGCAGG GAGAACCGAT ATCTCCCCCC AGGTGCAGTC GATACTCGGA TATTACAAGG GGGAGAGTGC ATACGAGAAG CCAGTAACCG GGTCATACTT CGACATCACC GCACAGGGGT CAACGCTGCC GATCTTAAAT CTCAACGATG CCTACAACGA TCCTGCCGAT GGGAACACCT ACTCCTTGAA GACCTCTGAC GCTCCCTATG TAGCACCAGT GGTCACCGTG ACTCAAAACC CCACTCTGCC CCCTGAGCAG GAGATCAATC CTGTCCCGAT CACCACCCCG GTGATCCTAG ACCCGTACCC CATCCCGGGA AGGATTGAAG CTGAGAATTA CCTGCCTGGT GCAGAGGTTG GGTATCATGA CACGACCTCA GGGAATGACG GATCGGTGTA CAGATTCGAT GATGTAGATG TAGAACGGCT TGCTGATGGC AGTGGGTATG ACGTTGGATT CATCAGATCA GGAGAATGGC TGAAGTACAA TATATCTGTC CAGACTGCAG GCATTTACTA CCTTGACTTC CAGGTGGCTT CACCCTTCAG CGATAAATCG TTCACCTTCC AGATCGATGG CACAAATGCC GGCGGGGTTA CGGTGCCGAA TACTGGTTCG TACGACTCCT ACTCCACCGT CAGGACGCAG GTGTACCTGG CTGCCGGTAT CCACCAACTC AAGCTCGTCT TCGATAATGC AGACAACTCC AACCTGGACT ACATCGACGT GCTCTCTGCA TCAGGCGGGT CCCAGACACC CATACCCACC GTGACCGTCC TTCCGACGAC CACCGCCACG ACACCACCAA CCACACAGAC GATTGTACCA GTGCTGACGA TGCCAACAAT CCCCAATCAT ACCCTCCCGA CCAAGATCGA GGCCAGAGAC TTTGATCTCG GCGGCGAAGG GGTTGCCTAT CACGATACCA CCACGGGTAA CCAGGGAGGG GCTTACCGGC CTGAGGACGT CGACATCAGC CACAGTGCAT CAGAAGGATC CGATGTGGTC ACCGGGATCA GCGCTGGCGA ATGGGTCAGG TATACAGTTA CCATACCCAG TGGTGGCATC TACACCGCCT CCTTCCGAGT TGCCGGCATC AACGGCGGTA CCCGGTTCGG GGTACAGCTG GACGGGGCGG ACATCAGTCT GATCTCTGTG CCTGACACAG GTTCCCTCGA CCAGTTCACC ACCGTCAAAC GGATGGTCTG GCTTCCCTCG GGGAACCATA CCCTGGAGCT CACCTTCAAC GATCCGATGG CCATCGAATC GATCGACCTC CAGAGCCTGA CGGCGCCGAC CACACCCATA CCGACATCCA CTACGCCGGC CCCGACCACC GTTCCAACCG AGACCGTCCC CGTGAACACG ACGACGCCAG CCCCCACGCA GACCGCAAAC ATAACACCCA ACCAGACACC GTCATCAGGG GCGTTCATTC AGCACACCTT CCCGACCCGG ATTGAGGGCG AGGACTATGA TTATGGCGGA CAGGGTGTCG GGTATTACGA CCTGACCCCG GAGGAGGAGA CCCCCCTGTA CAGGAGTGAT GGTGTCGACA TCAAATACTC ACAGTCCCGG GGGTCCTACT ACGTCACCGC CGACGTCGAC GGAGAATGGC TCGCCTATAC CGTGACGATC CCGACCAGTG GTATCTATAC CCTGAACTTC GACCTGGCAG GGAACGGACC CTCAGCCTGT TCGCTTGAGG TGGATAACTC AAGTGTCTGC TCGATCGTCG GACTGGATAC CGGTTCCATG ACCACCTTCC AGGAGGTCCA GCGGCAGGCC TGGCTTCCAG CCGGTACCCA TACCCTGAAG TTGAACTTCG CATCCCCAAT GGCAGTGAAC TATATCGATG CCTGGCTCTC CAACGGGCCA ACCCCAACCT TCACCACCCG GCCGGATGTA ACCCCACCCG CAACCCCAGT GGTCACCACC CCGGTTGTGA CCCCCACCAC GAACCTGACA CCCACGGTGA CGATCACCCG GACAACAGAA CCCACCACAA TGGTCCCGAC GACACCAGTC CAGACCCCGA CCACCGTCAC CACAGCCCCA ACACCGACCA TAACAGCGGC GCCACCCTAC CAACTCGGGA TGCCACACCA GATCCCATCC CGGATCGAGG CAGAAGATTT CGACCTCGGT GGCGAAGGGG TAGCCTATCA CGACATAACG ACAAGTAACG ATGGTGGGCA GTATCGTCCC GACGAAGGGG TCGATATCGA GTATAACCCG ACCGAGCAGA GTTATAACAT CGGCTGGGTC TTCCCCGGCG AGTGGACCCG GTACACAGTG AACGTAACCG CTGCAGGAAC CTACACAGCA GACTTCCGAG TCTCGACTGC CTGGAATGGG ATCTCCCTCG TCATGATGCT GGATGACACT TCAACCCCGC TGACGACCGT CGATGTGCCA AACACCGGCT CCTATGGAAC CTACACAACG GTCCACAGGA CGGTATACCT CCCTGCAGGC CAGCACCAGA TCAAACTGCT CTACAACGGC TACGAGAACA TCAACTACAT AGAGTTCACG CCGACAGACA CACCAGTGAC CACGCAGACC ACGTTGCTGC CAGCCACATC ACCACCCACG ACGACGCCAA CCACCACCGT CCTGACGACG GCACCGACCA CCATCGGGAC ACCAGGTACC GGGACCACAT CACCCTATCT GCAGCACACC CTCCCCACGA AGATCGAGGC AGAGGACTTT GACAACGGCG GCGAAGGATA CGCCTACCAT GACACCACCG CCCTGAACGA GGGAGGGCAG TATCGCCCTG CGGAAGGGGT CGACATCGAA TACAGCCAGC AGGAGATGAG TTACAATGTC GGCTGGATCA GGGACGGCGA ATGGCTCCAG TACACTGTAA ATGTGCCAGC CACCGGGACT TACACCACCA CATTCCGGAT CGCAACACCT GGTCTCGGAC GACAGATCCA GGTCTCTGTC GACGGAAACC CAATCACCAC CGTCGGGATA CCGACCTCAA ATTCGTTCGA TGTCTATCAG GATGTCGTCG CCCAGGTATC ACTTCCTGCC GGCACCCATC AGGTCAGACT GCTGTTGAAG GGCGGGTCGA TGAACCTGAA CTATATGACC TTCGCATCAC CTGCAGGTCC GGTGACCACG CAGACCACCC TGCTGCCGGT CACATCACCA CCCACGACCC AACCCTCGAC AACCATCCCG ACGACGGTGC CGACCACCCT TGGGACACCA GGTACCGGGA CCACATCACC CTACCTGCAG CACACCCTTC CAGCGAAGAT CGAGGCAGAG GACTTTGACA ACGGCGGCGA AGGATACGCT TACCATGACA CCACCGCCCT GAACGAGGGA GGGCAGTATC GCCCTGCGGA AGGGGTCGAC ATCGAATACA GCCAGCAGGA GAAGAGTTAC GACGTCGGCT GGATCAGGGA CGGTGAATGG CTCCTCTATA CCGTGAACGT GCCGACCGCC GGAACCTACA CCACCACGTT CCGAGCAGCC GTCCCTACCG CAGGGGCCCA TATCCAGATG CAGGTGGACG GAACTACTCT CGCAGACCCT ATCCTCACCA CGACCGGTTC CTTTGATACC TACGCGGACA CCGTCGTCCA GGTCTCACTC TCTGCCGGTA CCCACACGAT CAAGCTGCTC CCCGGGGGTT CGATGAACCT GAACTATTTC ACCTTCAGTG CAGTTCAGCA GCCGACCCGG ACTCCGACAC AGGTAATCTC CACCATCCCG ACGATGCCAC CGACGACTCA GACCCCCACT TCCACCGTGA CCCAGGCAAC CACTTACAAG GGTACCCCAT TCCGGCCCCA TGTGCTACCT GCACGGATCG AAGCCGAGGA CTATGATCTC GGTGGTGAAG GGGTAGCCTA CCTCGACACC ACCACAGGTA ACCAAGGCGG AGCCTACCGG CAGGACGACG TCGACATCGA ATACAACACA GGCGAACGGT CCTTTGATGT CGGCTGGGTG AGGAACGGCG AATGGCTCAC CTACACTGTC ACCGCAGGGG CAACAAGAAC CTACACCGGC TCATTCAGGG TTGCAACTCC GACAGCGGGG AAACAGATCC GGATCACGGT CGATGGCAGT GATGCCGGCG TCGTCACCGT CCCGGCCACC GGCGGCATAA ACCAGTACAG TACCGTGACC GCCGGGATCC CGCTGACCCC GGGTGTTCAC CAGATCAGAC TCACGTTCGT CGGCGATGAA CTGAACTTCA ACTACTTTGA GTTGAACTGA
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Protein sequence | MNKPGTVQIL IALLLLLCLI EGAAAVTVVV AAQDSSALSK TSAQFICTGS GDQDQIKAAI ASLPWDGGTV LLKEGTYHCT DNIVPGAYTT LKGEGVDKTI IDIQGYYMGI KVDQPYVTLE DFTITGRGWV RITASHIQVR NVAAKDDLLG YYPGKVDDMG ANGAFFVWAD NRVVEDIEFN QCSATNIGTH GFNLNGQGTP KMIKNIRFID CSATQCGNAE GWPWATGFDF HESNDLVDCQ VIRCVANNNW ESGFHFEPGD NQQNIVLTDC LSTNNGQRNT NEGDFTVQPP VAAHFYMAGY TIAMGTTLNN CRSINNRNYG FYDEQNGDNV FNGCTDEGSG YGWKLCKDVE DVQLNNCTSV DAQNWALWIA YAHNIQVRGF QQYSAAGRTD ISPQVQSILG YYKGESAYEK PVTGSYFDIT AQGSTLPILN LNDAYNDPAD GNTYSLKTSD APYVAPVVTV TQNPTLPPEQ EINPVPITTP VILDPYPIPG RIEAENYLPG AEVGYHDTTS GNDGSVYRFD DVDVERLADG SGYDVGFIRS GEWLKYNISV QTAGIYYLDF QVASPFSDKS FTFQIDGTNA GGVTVPNTGS YDSYSTVRTQ VYLAAGIHQL KLVFDNADNS NLDYIDVLSA SGGSQTPIPT VTVLPTTTAT TPPTTQTIVP VLTMPTIPNH TLPTKIEARD FDLGGEGVAY HDTTTGNQGG AYRPEDVDIS HSASEGSDVV TGISAGEWVR YTVTIPSGGI YTASFRVAGI NGGTRFGVQL DGADISLISV PDTGSLDQFT TVKRMVWLPS GNHTLELTFN DPMAIESIDL QSLTAPTTPI PTSTTPAPTT VPTETVPVNT TTPAPTQTAN ITPNQTPSSG AFIQHTFPTR IEGEDYDYGG QGVGYYDLTP EEETPLYRSD GVDIKYSQSR GSYYVTADVD GEWLAYTVTI PTSGIYTLNF DLAGNGPSAC SLEVDNSSVC SIVGLDTGSM TTFQEVQRQA WLPAGTHTLK LNFASPMAVN YIDAWLSNGP TPTFTTRPDV TPPATPVVTT PVVTPTTNLT PTVTITRTTE PTTMVPTTPV QTPTTVTTAP TPTITAAPPY QLGMPHQIPS RIEAEDFDLG GEGVAYHDIT TSNDGGQYRP DEGVDIEYNP TEQSYNIGWV FPGEWTRYTV NVTAAGTYTA DFRVSTAWNG ISLVMMLDDT STPLTTVDVP NTGSYGTYTT VHRTVYLPAG QHQIKLLYNG YENINYIEFT PTDTPVTTQT TLLPATSPPT TTPTTTVLTT APTTIGTPGT GTTSPYLQHT LPTKIEAEDF DNGGEGYAYH DTTALNEGGQ YRPAEGVDIE YSQQEMSYNV GWIRDGEWLQ YTVNVPATGT YTTTFRIATP GLGRQIQVSV DGNPITTVGI PTSNSFDVYQ DVVAQVSLPA GTHQVRLLLK GGSMNLNYMT FASPAGPVTT QTTLLPVTSP PTTQPSTTIP TTVPTTLGTP GTGTTSPYLQ HTLPAKIEAE DFDNGGEGYA YHDTTALNEG GQYRPAEGVD IEYSQQEKSY DVGWIRDGEW LLYTVNVPTA GTYTTTFRAA VPTAGAHIQM QVDGTTLADP ILTTTGSFDT YADTVVQVSL SAGTHTIKLL PGGSMNLNYF TFSAVQQPTR TPTQVISTIP TMPPTTQTPT STVTQATTYK GTPFRPHVLP ARIEAEDYDL GGEGVAYLDT TTGNQGGAYR QDDVDIEYNT GERSFDVGWV RNGEWLTYTV TAGATRTYTG SFRVATPTAG KQIRITVDGS DAGVVTVPAT GGINQYSTVT AGIPLTPGVH QIRLTFVGDE LNFNYFELN
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