| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0462 |
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| Symbol | rps5p |
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| ID | 7272786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 468992 |
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| End bp | 469615 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643569108 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_002465559 |
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| Protein GI | 219851127 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.599903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATATG AAGAACATCA CCAAGAATGG GTTCCACTCA CTGGTCTGGG AAGGCAGGTT
ATATCAGGTG AATTGACCAG CATCGACCAG ATCTTCGACT CGGGAAAACC GATCAAGGAA
CCTCAGATCG TGGACGCATT CCTGCCGGAC CTCGTTGATG AGGTTCTGGA TATCGAGATG
GTCCAGCGGA TGACTGACTC TGGTCGCAGA GTCAAGTTCA GAGCTGTCGT CGTGGTCGGA
AACCGCGATG GATATATTGG ATTCGGACAG GGCAAGGATG TCCAGGTCGG AAACGCGATC
AAGAAAGCGA TCGACAATGC CAAGGTCAAC ATCATCAAGG TGCGCAGAGG ATGCGGTTCA
TGGGAATGTG GCTGCGAACT GAAGCACTCG ATCCCCATGC AAGTGCAGGG GAAGGCCGGC
AGTGTCAAGG TCACCTTAAA GCCAGCCCCT CAGGGGATTG GACTTGTCAC CGGTGACATC
AGCAAGAAGG TGCTCGAACT TGCAGGGATC AAGGATGTCT GGACGTTCAG CAATGGTCAA
ACCAGAACCA CGATCAACTT TGCGAAGGCA ACCTTCAATG CACTCCAGCA GACGAATATG
ATCAGAACCG GAGGATCTGA GTAA
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| Protein sequence | MAYEEHHQEW VPLTGLGRQV ISGELTSIDQ IFDSGKPIKE PQIVDAFLPD LVDEVLDIEM
VQRMTDSGRR VKFRAVVVVG NRDGYIGFGQ GKDVQVGNAI KKAIDNAKVN IIKVRRGCGS
WECGCELKHS IPMQVQGKAG SVKVTLKPAP QGIGLVTGDI SKKVLELAGI KDVWTFSNGQ
TRTTINFAKA TFNALQQTNM IRTGGSE
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