| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0461 |
|---|
| Symbol | rpl18p |
|---|
| ID | 7272785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 468463 |
|---|
| End bp | 468990 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643569107 |
|---|
| Product | 50S ribosomal protein L18P |
|---|
| Protein accession | YP_002465558 |
|---|
| Protein GI | 219851126 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.225361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCG GACCCAGGTA TTTTGTTCCT TTTAGAAGGA GAAGAGAGGG CAAGACCGAT
TACTATAAGA GAGGCAAACT GATTGTCGCC GAGCAGCCGC GTATGGTTGT GCGAAAGACC
AACCGGCATA TCATTGTGCA GATGATCGTT GCAGAGATGG AGGGCGACAA GACCCTGGTC
ACTGCAAACT CAGCTGAACT GCTGGATTAT GGGTACAAGG GCTCAACTTC CAACACACCA
GCTGCTTACC TGACTGGTAT GTTGTTCGCG GTCAAGGCGC TGAATGCAGA TCATCCTGCT
GCGATCCTCG ATATCGGGCT GAACCGTGCG ACCTATGGAG CAAAGGTCTT CGCTGCACTG
AAAGGTGCAG TGGAAGCAGG CCTCGATGTT CCGCACGGTG AAGAGATCCT CCCGGCTGAC
GAACGTGTCA AGGGCGAGCA TATCGCTGCA TATGCTCCTG ACCGTGCAGG AGACCTTGTT
GAGAATGTTG AATCGGCCGC TCAGACCATC ATGAAGGAGC TGGCATAA
|
|---|
| Protein sequence | MAVGPRYFVP FRRRREGKTD YYKRGKLIVA EQPRMVVRKT NRHIIVQMIV AEMEGDKTLV
TANSAELLDY GYKGSTSNTP AAYLTGMLFA VKALNADHPA AILDIGLNRA TYGAKVFAAL
KGAVEAGLDV PHGEEILPAD ERVKGEHIAA YAPDRAGDLV ENVESAAQTI MKELA
|
|---|
| |