| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0443 |
|---|
| Symbol | rpl4lp |
|---|
| ID | 7272767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 460342 |
|---|
| End bp | 461091 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643569089 |
|---|
| Product | 50S ribosomal protein L4P |
|---|
| Protein accession | YP_002465540 |
|---|
| Protein GI | 219851108 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0088] Ribosomal protein L4 |
|---|
| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0343927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.296699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC AGATTATAAG ACTTGATGGC GGCGTCGCTG AAGAGATCGA GCTTCCTGCA
GTCTTTGCGG AAGCATACCG CCCGGACCTG ATCAGGAAGG CAGTGGTTGC ACTCCAATCA
ACCCGCAGGC AGCCGCATGG GACCAATCCC TATGCAGGCA TCTGCTCGTC GGCAGTCGGC
TGGGGGAGTG GCCGTGGTGC CTCCCATGTA CCGAGGCTGA AGAACGGTTC ACGTGCAGCC
AAGGTTCCAC AGGCAAAGGG TGGTCGGGCA GCTCATCCAC CGAAGGTAGA GAAGATCCTG
ATTCGGGATA TCAATAAGAA AGAGAAGCAG AAGGCATTCC GCTCAGCAAT TGCAGCAAGC
GTTTGTGAAG ACCTTGTTCG CGCACGCGGA CATCAGTTCG AGGGTGCATG CCAGGTTGTC
TTCGAGGATG CCTTTGCGGG GCTGACCAAG ACCTCCGAGA TCATCACTGC ATTGACCGCA
GCTGGCGTCT ATGCAGATGT CGAACGCTCC AAGGCCTCTA AGAAGGTCCG GGCTGGGCGG
GGAAAACTTC GTGGCCGCAG ATACAAGCAG CGCAAGAGCC TGCTGATTGT GACCCGGGAC
GAACCGCTCG CGGCAGCAGC GAACCTGGCC GGGGTCGACG TGGTTTCAGT GAACGCACTG
AATACCGAAC TGCTGGCACC GGGTGCACAG GCAGGACGAC TGACCGTCTG GACGCAGGGC
GCACTCAACT GGCTTGGTGA GAGACGATGA
|
|---|
| Protein sequence | MKAQIIRLDG GVAEEIELPA VFAEAYRPDL IRKAVVALQS TRRQPHGTNP YAGICSSAVG
WGSGRGASHV PRLKNGSRAA KVPQAKGGRA AHPPKVEKIL IRDINKKEKQ KAFRSAIAAS
VCEDLVRARG HQFEGACQVV FEDAFAGLTK TSEIITALTA AGVYADVERS KASKKVRAGR
GKLRGRRYKQ RKSLLIVTRD EPLAAAANLA GVDVVSVNAL NTELLAPGAQ AGRLTVWTQG
ALNWLGERR
|
|---|
| |