| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0441 |
|---|
| Symbol | |
|---|
| ID | 7272765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 457949 |
|---|
| End bp | 458689 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643569087 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_002465538 |
|---|
| Protein GI | 219851106 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0283265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.303699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGA GAATCGGCCA TAGATTTATG AGAGAGACGG CTGGAGATGA TCTCAACCCT
TCTGACCAGT CGATGGGACT TCCACAACCT CTGCTCGAAC TCCCCTATGA TGGAAAAGGA
CGTATCATAC ATCTACCCAA CCCGGACTCG CTCACGGTTC CGGATCTTGA TCTCTGGACT
GCTATCAACA TACGAACCAC CTCCAGGGAA TACACCTCCA CCCCATTGAC CCTCGATGAA
CTCTCCTACC TGCTCTGGAC AACCCAGGGG ATCAAGGGTA TCGTGAATGG TGAGTATACC
TTCAGGACGG TTCCATCAGC CGGTGCCAGA CATGCCATCG AGACGAACCT GCTGCTGAAC
CGGGTCGAAG GGGTGACTCC CGGGCTGTAT CGGTATCTGG CACAGGACCA CCACCTCCTT
GAGATCTCAA CCGATCCTGA CCTTTCCAAC AAGGTTGCCA TGGCCTGCTA TGATCAACCA
TTCATCAGGA CGAGTGCAGC CACATTTCTC TGGACTGCCG TGGTCTATCG GATGACCTGG
CGGTATGGCG AACGGGGGTA CCGATATTTG CTTCTGGACG CAGGGCATAT CTGCCAGAAT
CTGTACCTGG CCGCAGAGGC GATCGGGGCC GGCGTCTGCG CAATCGGGGC CTTTGATGAT
GACCAGATAA ACCGTCTGCT CGGTCTCGAC GGGACAGAAC AGTCGATGAT CTACGCGGCG
ACGATTGGAA AAAGGAGTTA A
|
|---|
| Protein sequence | MIERIGHRFM RETAGDDLNP SDQSMGLPQP LLELPYDGKG RIIHLPNPDS LTVPDLDLWT
AINIRTTSRE YTSTPLTLDE LSYLLWTTQG IKGIVNGEYT FRTVPSAGAR HAIETNLLLN
RVEGVTPGLY RYLAQDHHLL EISTDPDLSN KVAMACYDQP FIRTSAATFL WTAVVYRMTW
RYGERGYRYL LLDAGHICQN LYLAAEAIGA GVCAIGAFDD DQINRLLGLD GTEQSMIYAA
TIGKRS
|
|---|
| |