Gene Mpal_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0440 
Symbol 
ID7272763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp456840 
End bp457382 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID643569085 
Producthypothetical protein 
Protein accessionYP_002465537 
Protein GI219851105 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0507632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.460019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTG AAATTCTCAC AAAAGGCGGA CTTCTGACCC GCGGTATTTT TGCCCTGCTC 
ATTGGGATTC TCTGTTTTAC AATCCCGATC GGGATGCAAG CCATCATTGC TTATATCATC
GGGATATTCC TCCTGATCAT CTCCATCGTC ACCATCTCGA TCTCACTCAG CGAGTCCGGA
CGAGTGCAGT GGGGGGTGCT CATCCTCTCG ATCATCGGTG TGATCATCGC ACTTCTCATG
TTCATCTCGC CGTTTGCAAC GTTCGTTGCC CTGACCGTCC TGATCGCAGC ATGGGCCATC
ATCACGGGAT TAGCAGATCT CATCATTGCA TTCTCCCTAC AGGAACTTCC CTTCAGGATC
CTGCTGGGTA TCAACGGCAT TTTCGCGGTG TTATTCGGTC TCCTGATCGG CTTATCCCCA
CTCCCAACAG AGGGGTCGCT CGTCATCATT ATGCTCCTGG GCATCTACTG CCTCTTCTTC
GGCATCATCA GCCTCATCAC TGGTTTACTT ATGAAGAAAG GCGAAGCCGT GATCACGCTC
TGA
 
Protein sequence
MEPEILTKGG LLTRGIFALL IGILCFTIPI GMQAIIAYII GIFLLIISIV TISISLSESG 
RVQWGVLILS IIGVIIALLM FISPFATFVA LTVLIAAWAI ITGLADLIIA FSLQELPFRI
LLGINGIFAV LFGLLIGLSP LPTEGSLVII MLLGIYCLFF GIISLITGLL MKKGEAVITL