| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0431 |
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| Symbol | |
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| ID | 7271457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 447192 |
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| End bp | 450092 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569076 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002465528 |
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| Protein GI | 219851096 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.174739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TGAGCCGTAC AGAGATCCGG AGGTCTGCCC TCCTCCTGGC TCTGATACTA
TTATCTGGAT GCCTGCTGAT CCCAGGGGCA TTCGCAGTCA CGGTATCGAC CGGCACTTAT
CAGATTGATG CTGTGGGAAA TACAACGACC ATCCCTATTA TGATGGATCA GGCACCCAAC
GGATTCGCCT ATTATAAGAT CCAGATCAGT CTTACGAATC CGGATGTTGC AACGATCACA
GATTGTTCAT TCCCAACCTG GCTGGGACTG AATCTGAATA CAGCACTCCC GGATAAGAGT
GTGGTGATCC GGGGAGGAGA CCTTACCAAG GCCCATGTCA AAGCAGGGGA TACGAATATC
CTCCTCGCTA CGCTGACTGT ACAGGGTACT GCAGTTGGGA CAACTCCGAT CACAGTGACA
GTCTCTCCTC CAACCTATGT GGTTCAGGAT AAGGATGTCG TTAACTATGC AGTCACTACC
CCTGCCGGTC AACTGACCGT CGGTACCCCG GTTACCCCTA CCCCGACGGT GCAGCCCCCG
GTCGCTGACT TCTCGGTCGA CACGACTAAT GGAACAGCAC CGATGACGGT TCATATCACC
GATAAGTCTG TGAACGCGAC CACGATCAAG TACAGTCTTG GGGATGGAAC ATCAACAGGT
TCACTCTCTC CAGGAGGTGT CACCCCGTAC ACCTATGTTG CGGCAGGTAC CTTCACGCTT
ACTCAGACCG CGACCAATGC AGCAGGGTCA ACCAACAAGA CTGTGACAAT AACGGTTTTG
GGAGCACCGA CAACGACCCC AACGGTCACG CCTACCACTC CAACAGTGAC CCCTACAACT
CCAACGGTTA CGCCTACCAC TCCAACAGTA ACCCCGACTA CTCCAACCGT TACGCCAACC
CCGACGGTAA CTGTTACACC CGGCACCCTG ATTGCGGACT TCCAGGTGGC GACCACTCCA
GGCAGCAACC TGGTCAAGAT CACTGATAAA TCGACGAACG CGTCGACGAT CAGGTACAAC
CTCGGTGACG GAGTCTCCAC CAAGAATATG CCTCCGAACG GACCGGTGCT CTCCTACTAT
TACATCACCG CGAACACCTA CACGATCACC CAGACTGCGG TCAGTGCGAC TGGACAGACC
GCCACCAAGC AGGTGACGGT GACCGTCGGC GGCGCTCCAA CCATCACCAC AACGACGACG
ACCACCACCA CAGCGACGAC CACGGTCACT CCGACCGTCA CTGTCACACC GGGGTATCCG
GTGCCTGACT TCGCTCTCAC CACTCCAAGT TCGATGGGTA TCCAGATTGT CGACAACTCG
GTGAACGCGA CCTCGGTGAA ATACGATCTC GGTGACGGAA CCACGACCAA ACTCACTCAG
TTCCGGTACA CCTACTGGCA GGCCGGGACC TACACAATCA CGCTGACCGC AACCAATGCG
ATGGGCTCCT CGGTGAAGAC GGTCCAGGTG ACTGTGCCGG CTACTGTACC GACGACCACC
ACGCCCACAC CGACTGTTAC GGTTACATCG ACCGTTACAG CCACACCAAG CGGTCAACAG
CCATACAACG GACCGCATAA CGCTCCTGGC AAGGTCGAGG CAGAGGACTA TGACCTCGGC
GGCAACAACG TCGCCTACTA TGACACCACA TCAGGTAACG CAGGTGGGTT ATACCGCCAC
GACGATGTTG ATATCGAAAT AGAGGATGGC CCAAGCGGCT ATGATGTCGG TTACATCATC
GGCGGCGAAT ACCTCACTTA CTCAGTCGAT GCAGCAGCAG ACGGTGACTA CCCGATCACA
CTCAAAGTAG CCAACCCTGA CGCAGCTGCA AAGACGGTGA CCGTCTCAAC TGGTGGTGCT
TCGACCTCGG TCAGTATTTC ATCCACCGGC TCATTCGACA CCTACAACTC CTTCAACTCT
GCAGGCACGC TTCATCTCGA GCAGGGCAGA AACATCGTGA AGGTGGACTT CGGTGCCTCA
AGGATGAATT TCGATTACTT CACGATCGGG ACCGGTTCAC AGCCAACCAC AACTGTGACC
ACAACAGCAA CGACAGCTCA GCCAACCACG ACTGTGACCA CCACAGCAAC GACGGCTCAG
CCAACTGTGA CCACCACAGC GACGACGACT CAGCCAACCA CCACGACGGT CCAGCCGACC
GGCACCCCGC TCTCGACCCC TTACTATATG ATCAGCATGG TTCCAGGGCA TATCGAGTCA
TATTCCTATG ACAATGGCGG TGAAGGGGTC GCATATCATG ACACCACCAC AGCCAACCTC
GGTGGAAAAC TCCGTTCAGA TGGCGTGGAT ATTGAGTACA GCCAGTCAGA TGCCGGCTAT
AACATCGGGT ATGTTGCTGC TGGCGAATGG TTGATCTACT CGGTTCAGAT CGACACGGCA
GGGACCTACA CGGCTGCCAT CCGGGCATCG AACCCAGATA GCACGGACAA GCACATCGTC
CTCTCGCTCG AAGGGAGCAG CACTCCACTG GCGACCGTGA CCGTTCCGCC GACCGGTTCA
TTCGATACAT ACCAGACCAT CACAACGACC GTACAGCTGC CTGCTGGCAG GCACTGGCTG
AAGTTGAGCT TCCCAGAGAG CAGGGTGAAC CTCAGGTTTA TGGATATCAC CCGCGGGGCA
TCGACCGGAC CGATCGCAGC GACCGGCACA CCTACCCTGC TCGTCTCAAC CACCCCAGTT
GAGACCATTG TGCCTACCAC CCCGGCATCA GTGATCGACT CGATCACCAC CGCTACACCA
CTGGTGACCA TCTCCCCAGT GATCACTACC CCAGTGATCA CTACTCCGGT GATCACTACT
CCAGTGATCA CTACCCCTGT GATCACACAG GCGGCGGTCA TCACCCCAGA AGCAGAGAAT
AACACCTCAG TCAAGGTCTG A
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| Protein sequence | MNILSRTEIR RSALLLALIL LSGCLLIPGA FAVTVSTGTY QIDAVGNTTT IPIMMDQAPN
GFAYYKIQIS LTNPDVATIT DCSFPTWLGL NLNTALPDKS VVIRGGDLTK AHVKAGDTNI
LLATLTVQGT AVGTTPITVT VSPPTYVVQD KDVVNYAVTT PAGQLTVGTP VTPTPTVQPP
VADFSVDTTN GTAPMTVHIT DKSVNATTIK YSLGDGTSTG SLSPGGVTPY TYVAAGTFTL
TQTATNAAGS TNKTVTITVL GAPTTTPTVT PTTPTVTPTT PTVTPTTPTV TPTTPTVTPT
PTVTVTPGTL IADFQVATTP GSNLVKITDK STNASTIRYN LGDGVSTKNM PPNGPVLSYY
YITANTYTIT QTAVSATGQT ATKQVTVTVG GAPTITTTTT TTTTATTTVT PTVTVTPGYP
VPDFALTTPS SMGIQIVDNS VNATSVKYDL GDGTTTKLTQ FRYTYWQAGT YTITLTATNA
MGSSVKTVQV TVPATVPTTT TPTPTVTVTS TVTATPSGQQ PYNGPHNAPG KVEAEDYDLG
GNNVAYYDTT SGNAGGLYRH DDVDIEIEDG PSGYDVGYII GGEYLTYSVD AAADGDYPIT
LKVANPDAAA KTVTVSTGGA STSVSISSTG SFDTYNSFNS AGTLHLEQGR NIVKVDFGAS
RMNFDYFTIG TGSQPTTTVT TTATTAQPTT TVTTTATTAQ PTVTTTATTT QPTTTTVQPT
GTPLSTPYYM ISMVPGHIES YSYDNGGEGV AYHDTTTANL GGKLRSDGVD IEYSQSDAGY
NIGYVAAGEW LIYSVQIDTA GTYTAAIRAS NPDSTDKHIV LSLEGSSTPL ATVTVPPTGS
FDTYQTITTT VQLPAGRHWL KLSFPESRVN LRFMDITRGA STGPIAATGT PTLLVSTTPV
ETIVPTTPAS VIDSITTATP LVTISPVITT PVITTPVITT PVITTPVITQ AAVITPEAEN
NTSVKV
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