| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0426 |
|---|
| Symbol | |
|---|
| ID | 7271452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 441914 |
|---|
| End bp | 443230 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643569071 |
|---|
| Product | CRISPR-associated protein, TM1812 family |
|---|
| Protein accession | YP_002465523 |
|---|
| Protein GI | 219851091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02221] CRISPR-associated protein, TM1812 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTA CCTCCACCCC TCTGATCCTC CTTTCGTTCG TTGACCAGTC AGAGCCGGAG
CCTGGGGGCA GCACTGTATA TCGATGGGGC GACCTGACCT GTGCTGGTGA CGATCTTCTC
TCTGCCCTGA TAAAATTCTT TGAACCCGAT CGGGTGGTCC TCTTTGGAGA AGGGGATGGG
CCGGCCCCTG CCTCTTCGAA CGACATCCCT ATCCGGTGGC AGGCGATTCC GGCAGGAGAG
TCAGAGGCCG ACCTCTGGAC AGTCTTCTCT CTCCTCTGCA GTGTTGTGGA ACCGGGTGAC
CGGGTGATTG TGGAGATCCA GAACGGTTCC CGTCCCCTCT CGTTCATCAC CTTCGTCGCG
ATCCAGTACC TGCGCGAGAC AAAGGGTGTT CAGGTCGAGC GGATCTGCTC GACTGTTCCT
GGACCGAATG GTGAGTCGTT GATCCGGGAT CTCTCAGACT TTGTCACGGT CCTGGACTGG
ATGCGAGGGG TGCATGCATT CACGCAGCAT GTCGACGCTG AAGACCTGTC GGTGCTGATG
GGTGCCGTCC AAAATAAGGC TTATCGGGAT GGAATCGGGC ATCCGCTCAG TTTAAAACCC
TGGGGGCATG CCCTCTCCCT CTTCGCCCAG GCTGTCCGGC TCTCCCGGCC GCGGGAGGTG
ATGCATGCTG CTGATATCCT GACTTCCCAC TTTGCCGAGG TGACTACCGA GGTTCAGCAA
CTGGCTCCAC CGCTGGCCCC GGTGATGGAT CGGTTGCAGG AGGTGACCGC GATGGGGCGT
GGCGGCTCGC CTGACCGGTT GAGCTGGGAG GCGCTCTCGA TCGGTCTGAA CCTGATCGAG
TACCAGTGCC GGCATGACCT GATCATGCAG GCCGTCACCC TGGCCCGGGA ATGGTGCCTG
AACTATCTGA TCCTGGAACT TGACTATCAC CCTGACCAGT GGCTTGTCTG GGAGGTGCGG
GACGAGATCG GACGGACGAT CACCGGGGCT GCGCTGGAGG TTCGGCACCA TCCCTACGAG
GGGACCACCC TCTCGGTCAG GTTTACCCAA CTCGAGCAGA AGAACGATCT GGTCGCGCTC
TGGATCGTCC TAGCGGACCT GCGCAACGAT ATCGCCCACT GTGGGATGAA TCTGCAGCAG
AAGAGTGCCG TGACGATCCA GGGACGGACC GGGGATATGG TGGAGCGGCT CAGGCACCTG
GTCGCCAGTT CGTCCTGCCG GGTGCCGGGA GGGCGGTCAG GTGATGACCG CTCTCCGGAA
CTTCCACCAG GCGAGGGTGA ACGTGGCGAT GGCGAAGGCG ATCAGCCCGA GGAATGA
|
|---|
| Protein sequence | MTGTSTPLIL LSFVDQSEPE PGGSTVYRWG DLTCAGDDLL SALIKFFEPD RVVLFGEGDG
PAPASSNDIP IRWQAIPAGE SEADLWTVFS LLCSVVEPGD RVIVEIQNGS RPLSFITFVA
IQYLRETKGV QVERICSTVP GPNGESLIRD LSDFVTVLDW MRGVHAFTQH VDAEDLSVLM
GAVQNKAYRD GIGHPLSLKP WGHALSLFAQ AVRLSRPREV MHAADILTSH FAEVTTEVQQ
LAPPLAPVMD RLQEVTAMGR GGSPDRLSWE ALSIGLNLIE YQCRHDLIMQ AVTLAREWCL
NYLILELDYH PDQWLVWEVR DEIGRTITGA ALEVRHHPYE GTTLSVRFTQ LEQKNDLVAL
WIVLADLRND IAHCGMNLQQ KSAVTIQGRT GDMVERLRHL VASSSCRVPG GRSGDDRSPE
LPPGEGERGD GEGDQPEE
|
|---|
| |