Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0421 |
Symbol | |
ID | 7271447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 436463 |
End bp | 437605 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643569066 |
Product | aspartate aminotransferase |
Protein accession | YP_002465518 |
Protein GI | 219851086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.248364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCGC TCTCGGCGAA GATCGGTGCG CTGCCCCCCT CTGCCACCAT CGAGATCTCC AATACCGCCA AGAAGATGAA GCAGCAGGGG ATCGATGTGA TCAGCCTCAG CATTGGTGAG CCAGATTTCG ATACCCCGGA TCATATCAAG CAGGCGTGTA TCAGCGCCCT GCTGGCCGGA GAGACTCACT ATGCTCCCTC GGCCGGCACA CCCGCCCTCC TCTCTGCGAT CGCAGAGAAG ATCGGTGGGG AGAACAACGT CCCCTGCTCT CCAGGCGACG TGATCGTCAC CTGCGGGGCG AAGGACGCGA TCTACGAGGC GTTCGAGGCG GTGCTGAACC CCGGCGACGA GGCGCTGCTG CTCGATCCGT CCTGGGTCTC GTACGAGCCG GGTGTCCGGA TCGCTGGCGG GACGCCGGTC CATCATCACC TGAGCGAGGA GACCTTCCAG GTGGATGACA CCTTCCTCGA AAAGGTCACC AGAAAAACCC GGATGATCGT CGTCAACTCC CCTTCGAACC CGTCCGGTGC GGTCTTCACC GACAGGTCGC TCCGGATGAT CGCCGACCTC TGCATCGACC ACGACCTGAT CGCCCTCTCA GACGAGATCT ACGAGAAACT GGTCTATGGT GGTGCAGTTC ATCGGTCCCT CGGTTCGATC GACGGGATGG CCGAACGGAC GATCACGGTC AACGGGTTCT CGAAGGCCTA TGCGATGACC GGCTGGCGGC TTGGATACGC CGTGGCTCCG CCGGCCGTCC TCGCGCAGAT GATCAAGGTA CAGCAGCACA CGATCAGCCA TCCGACCACG TTCGCGATGG CCGGCGGGGT CGCTGCACTG AAGGGGGACC AGTCCTGCGT CGAAGCGATG CGGGTCGAGT TCGACCGCCG CCGGCAGTAC CTGCTCGGTG CCCTGGCCGA CCTCGGGTAC AGCACGGCCC CGGCCGAGGG AGCGTTCTAT GCCTATGTGA AGACCGGCGG CGACGATCTC GCCATCGCCA AGCAGTGGCT TTTGGAGGCG CATGTGGCCG TCACCCCCGG CACCGCCTTC TCCACCCCCG GCTGGCTCCG TCTCTCGTAT GCGGCCTCGC TCGAGACCCT TAAAACGGCG GTCGACCGGA TCCGTGTGTT GAACGGGAAC TGA
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Protein sequence | MRPLSAKIGA LPPSATIEIS NTAKKMKQQG IDVISLSIGE PDFDTPDHIK QACISALLAG ETHYAPSAGT PALLSAIAEK IGGENNVPCS PGDVIVTCGA KDAIYEAFEA VLNPGDEALL LDPSWVSYEP GVRIAGGTPV HHHLSEETFQ VDDTFLEKVT RKTRMIVVNS PSNPSGAVFT DRSLRMIADL CIDHDLIALS DEIYEKLVYG GAVHRSLGSI DGMAERTITV NGFSKAYAMT GWRLGYAVAP PAVLAQMIKV QQHTISHPTT FAMAGGVAAL KGDQSCVEAM RVEFDRRRQY LLGALADLGY STAPAEGAFY AYVKTGGDDL AIAKQWLLEA HVAVTPGTAF STPGWLRLSY AASLETLKTA VDRIRVLNGN
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