| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0411 |
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| Symbol | |
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| ID | 7271437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 429490 |
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| End bp | 430584 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569056 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002465508 |
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| Protein GI | 219851076 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG ATGTCATACT GCATGATGTG CTGGCCGGCC GTCGGCTGAC TGAAGCCGAG
GGGCTGCACC TGCTCTCGAT CCGGGGGCGC GAGATCTTCA AGGTCCTCGC TGCGGCCGAT
GAGCTTCGCG AGGAGCGGGT CGGCGAGGCC GTCACCTATG TCAGAAATCA GAACCTTCAC
GTGACCAACA TCTGCAAGAA CCTCTGTGGG TTCTGCGGGT TCGGGCGAAG ATCCGGTGAC
GAAGGAGCCT ACCTGAACAG CATCGATGTG ATCACAGAGA ATGCTCTGCT GGCGAAAGAA
CGGGGGGTCA CCGAGGTCTG TTTCCTCTCG GGTGTGCACC CGGCATTCAC GCTCCAGTCC
TACATGGACA TGATCGGGGC CGTCCATGCG GTGATCCTAG AGGCAGATAT TCACGCCTGC
AGCCCAGAGG AGGTCTCGTT CGTCGCAAAG AAGAGCGGAC TTTCCACGGC CGAGGTGCTC
GATCAACTGC GGGCCGCCGG CCTCGGGACC CTGCAGGGAA CTGCAGCAGA GATCCTGGTG
CAGGAGGTTC GGGATGTGAT CTGTCCGCGC AAGGTTCCTG GTGCAGAATG GATCCGGATC
ATCAAGGAGG CGCATGGTAT GGGGATCCGT TCGACCGCCA CCATCATGTA CGGCTCCTGC
GAGTCAGCCA GGGACCGAAT CCGGCATCTG GGAATGCTGC GTGAGATCCA GGACGAGACC
GGAGGGTTCA CCGAACTGGT CCCCATGACG TACATCCATC AGAACACCCC GCTCTTTATG
GCAGGTAAGG CCCCCTCAGG GGCCACCGGA AGCGAAGATC TGCTGCTGCT GGCTGTCTCG
CGCCTCTTCC TCGACAACTT CGATCACATT CAGGTCTCCT GGGGGAAACT CGGGCTGAAG
ATGACCCAGA TCGGGCTCCT CTCTGGTGGT GATGACCTCG GTGGGACGAT GTATGTTGAC
GATGTTACCG TGGACGCCGG GGCGAAGGAG GCTGCTTACC TCGATCCCAC CGAGATGGGC
AGGATCTGCA AGGATCTGGG TCGACCGCTG ATCGAGCGGA ACACCGTCTA CCAGCCGGTG
CACCGGACGT CCTGA
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| Protein sequence | MDTDVILHDV LAGRRLTEAE GLHLLSIRGR EIFKVLAAAD ELREERVGEA VTYVRNQNLH
VTNICKNLCG FCGFGRRSGD EGAYLNSIDV ITENALLAKE RGVTEVCFLS GVHPAFTLQS
YMDMIGAVHA VILEADIHAC SPEEVSFVAK KSGLSTAEVL DQLRAAGLGT LQGTAAEILV
QEVRDVICPR KVPGAEWIRI IKEAHGMGIR STATIMYGSC ESARDRIRHL GMLREIQDET
GGFTELVPMT YIHQNTPLFM AGKAPSGATG SEDLLLLAVS RLFLDNFDHI QVSWGKLGLK
MTQIGLLSGG DDLGGTMYVD DVTVDAGAKE AAYLDPTEMG RICKDLGRPL IERNTVYQPV
HRTS
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