| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0408 |
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| Symbol | |
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| ID | 7271434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 426193 |
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| End bp | 427221 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643569053 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002465505 |
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| Protein GI | 219851073 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.118189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAG AGAGTTCACC AGGAAACGAG GAGGAGACAG ACGCCTATAG GGCCTGTATA
AATGAGTGGG AACGAACCTT CGACGCAATC GTCGACCCGA TCTACATCCT CAACACCTCA
GGGGAGATCC TCAGGGTCAA CCGGGCCGCT GCAGACCTGG TCGGCATGGA GCCGGAAGCG
ATCATAGGAC AGCACTGTTA CCATGTTGTG CACAGGACTG AACACTTCAC CAGTGGGTGC
CCCTTCGTGA GGATGAAAAC ATCCTTGCGG CGGGAGAGTT ACCAGGTCCA GATTCAGGAC
CGCTGGTTCA TCGCGACCGT CGACCCGGTG ATGGACGACC AGAACAGGTT GCTCGGTGCG
GTCCATATCC TGACCGACAT CACCGAATTG AAGATCGGAC ATGAAGCAGA GGCGCGCCTG
GCCGCGATCG TCACCTCGAC AGAGAATGCG ATCGTCGGCA GCACCCCCGA CGGGACGATC
ACCTCCTGGA ATACTGGCGC CAGAATGCTG ACAGGATATA CCGGAGAGGA GATGGTCGGC
TCGTCTCTGC AGAGACTGGT CAGACCAGAG GACCAGGAAG GAGTCAACAC GATTCTGGCG
GCGATCACCC GGGGCGACCG ACTCCACCCG ACCGAACAGA TGATACTCAG GAAGGATGGT
TCGACGATGG AGGTCTCGCT CTCGGTCTCG CCGATCTTTG ATCAGGCAGG GGCGATCACT
GGAGTCTCAT GGATCTGTCG GGATATCTCC GGGCAGCGGA GGGCGGAACG GGCCCTGGTC
GCCTACCTGA CCGAGGCGGC CCTGCGGCTT CGCAACCCGG TCGCGATCAT CAGGGATCAA
CTGGCCCAGG TGATCACCCT CGTCGACGAA GGGGAGATGA CCGCAGAGCA TGCGCTGATG
CTGCTTCGGG TCCAGGTCAG CAACGCCACC CAGATCCTCG CCAATATCGA CGACCTGAAC
CGTATGATCG CAGACGAGGC CGACGATATC CCGGATGCTT ACCGCCGATT TCTGATGCGA
GGAACCTGA
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| Protein sequence | MKRESSPGNE EETDAYRACI NEWERTFDAI VDPIYILNTS GEILRVNRAA ADLVGMEPEA
IIGQHCYHVV HRTEHFTSGC PFVRMKTSLR RESYQVQIQD RWFIATVDPV MDDQNRLLGA
VHILTDITEL KIGHEAEARL AAIVTSTENA IVGSTPDGTI TSWNTGARML TGYTGEEMVG
SSLQRLVRPE DQEGVNTILA AITRGDRLHP TEQMILRKDG STMEVSLSVS PIFDQAGAIT
GVSWICRDIS GQRRAERALV AYLTEAALRL RNPVAIIRDQ LAQVITLVDE GEMTAEHALM
LLRVQVSNAT QILANIDDLN RMIADEADDI PDAYRRFLMR GT
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