| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0404 |
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| Symbol | |
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| ID | 7271430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 420440 |
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| End bp | 421846 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643569049 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002465501 |
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| Protein GI | 219851069 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.813596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAC TCCGCTCTAT CCCGGTCTGC CTGCTGGTAA CTGTTCTCTT TCTCCTGCTT
CTGGTCGCCC CGGTGGTCGG GACGGTCAGG ATCGTTCCGA TCGGCGACTC GATCACCCAG
GGAACCCTCC AGAACGACGA CGGACTCTCC CATCCGACCT ACCGGTACTG GCTCTGGCAG
ACTCTGAAGA GCAGAGGCTA CGACGTCGAC TTTGTCGGCA GTGTCGACCA GCCGCAACTC
CCGTACTCCT TCGACCAGGA TAACGAGGGG CATGACGGTT ACCGGACCCG CGATCTTCTC
GGCACCGATC GGCTGAAGAC CTGGCTCACG GGATACAGCC CCGACATCGC TATCGTCCAC
CTCGGGTCCA ATGATGCGAT GGACGGGGTG CCGGTGGAGA CGACGATCGG AAACCTCAAA
CAGATCGTCA CGATCCTCCG TGCGAAGAAC CCCTCGATCG TGATCCTGAT CGGGACGGTG
ATCCCGCGGG GCGGGTACGG TTCGAACCTG CCGGCCCTGA ACAGCGCCAT CCCGGGGATC
GCCGCCTCGA TGAGCACCCC CTCCTCCCCG ATCGTGATCG TCGACCAGTT CACCGGCTAC
GACGGGTATG ACGACAACCA GCCGAAACGG TACCTGCATC CGAACCAGCA GGGCGAGCAG
AAGATCGCAG CCAGGTATGC CGCGGCTCTG GCCCCGTACC TCGAGAGCCC CGGCCCGTAC
ACTGATCTCT CCATCCCCGG GCGGGTCGAG GCCGAGGCCT ATGATAAAGG AGGCGAAGGT
GTTGCCTACC ATGACACCAC CACCGGCAAC CAGGGGGGTG CCTACCGGCA GGATGATGTG
GACATCGAGT CCGGTGCCAG CGGCTATGAT CTCTGCTTCA TCCGCGATGG AGAGTGGGTG
AACTATACGG TGAATGTGGC CGCCGCCGGG GAGTATACGG CAACCTTCCG GACCGCGGCC
TGGAACGACG GGCATACGAT CACCCTCTCT GTCGACGGCA CCTCGGTCGG ATCGGCCGGA
CTGGCGAACA CCGGTTCCTC TGAAGCATAT GTCGACACCA CCATGTCGGT CTCATTGTCG
GCCGGCACCC ACACGCTGAC CGTTCAATTC TCCGGTGACG GCGAGAACCT GGACTATCTC
TCCTTCGCCG CGGTGCCGGT GACGACCCCG ACGTCGAGAC CGACGCTGCA GCCGATCCCG
CCGTCGACGC TGCAGCCGAC AGACCCTGAT CAGGACGGGC TGTACGAGGA TCTCAACGGC
AACGGGGCAC TCGATTTCAA TGACGTCGTC CTCTTCTTCG ACCGGATGGA CTGGATCGCA
GGCTATGAAC CCGTTGAAGT CTTCGACTTC GACCGGAACG GTCGGATCGA TTTCAATGAT
ATCGTCAGGG TCTTCTCTCT CCTCTGA
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| Protein sequence | MHPLRSIPVC LLVTVLFLLL LVAPVVGTVR IVPIGDSITQ GTLQNDDGLS HPTYRYWLWQ
TLKSRGYDVD FVGSVDQPQL PYSFDQDNEG HDGYRTRDLL GTDRLKTWLT GYSPDIAIVH
LGSNDAMDGV PVETTIGNLK QIVTILRAKN PSIVILIGTV IPRGGYGSNL PALNSAIPGI
AASMSTPSSP IVIVDQFTGY DGYDDNQPKR YLHPNQQGEQ KIAARYAAAL APYLESPGPY
TDLSIPGRVE AEAYDKGGEG VAYHDTTTGN QGGAYRQDDV DIESGASGYD LCFIRDGEWV
NYTVNVAAAG EYTATFRTAA WNDGHTITLS VDGTSVGSAG LANTGSSEAY VDTTMSVSLS
AGTHTLTVQF SGDGENLDYL SFAAVPVTTP TSRPTLQPIP PSTLQPTDPD QDGLYEDLNG
NGALDFNDVV LFFDRMDWIA GYEPVEVFDF DRNGRIDFND IVRVFSLL
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