| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0403 |
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| Symbol | |
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| ID | 7271429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 418925 |
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| End bp | 420397 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643569048 |
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| Product | succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_002465500 |
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| Protein GI | 219851068 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.864832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA TGACGATCAC CGTCTTCCGG CAGGACCCGG CGAAAGGGGA AGAGCCACGC
TATGTCCCGT ACACGATCGA GGTGAACGAA GGGGCACGGG TGCTCCACCT CCTTCATGCG
ATCCACGATC AGATCGACCC GACCCTCTCG TACCGGTACT GCTGCAGTTC AGGACAGTGC
GGCTCCTGTG CGGTCAGGGT GGACGGGAAG CCGGTGCTGG CCTGCACCGC CGAGGCCCGC
GACGGGATCA CCATCGAACC GCTGGCCCTG CCGCTGAAGA AGGACCTGAT GGTGGACCTG
GTCCCGCTCC TCGCCGACCT GCCGCCGCTG GTCCCCGGGC CTGAGTCGGT GATGGTGACC
AAGCGTGCTG TCGAGGCGAT CCGACCGCTC TCGACCTGTA TCGGCTGCCT CGCCTGTGTC
TCGATCTGTC CTGCCATGAA GGTCACCGAC TTTCTGGGCC CGACGGTGAT GCGACAGGAG
ATGCGGCTGG CCCTGGACAG CCGGGACACC TGCGACCGGG CCACCCGGGC CGTGGCTGAG
GGGCTCTTCA CCTGCACCTC CTGCCAGGCC TGCTGGGAGG TCTGTCCGAA GGAGATCCGG
ATCCCGGGCA AGGCGATCGA GAAACTCCGC TCCCTGGCCA ACAAGCAGGG GCTGACCCTC
CCGCGTCATC TGGAGGTGGC CGAACTGGTC CGGGCGACCG GTAGGAGTGT GACCCGCACC
GAACCGACGT TCCTGGAACT GGTCCCCGAT CAGATCGAGC CGTACGGGCC GGTCCGGGCG
ACCATCGGGT TCTTTGTCGG GTGCATGTAC AATATGCGCC TCCCAAAGAC CGCGCTCGAT
GCGATGGAGG TGATGAAGCG GAACGGGATC AGGGTGATCA TCCCGCGTGA ACAGGTCTGC
TGCGGTTCGC CGCTCTTCCG GACCGGGCAG GGGAAGTACC TCGCCATGCT GGTCCGCCGG
AACATCGATG CGTTCCGGTT CAGAAAGATC GATATCGTGA TGACGATGTG TGCCGGCTGC
GGGTCGACGA TCAAGAACGA TTACCTGCAT GTCCCCTTCA AGGTCATGGA CATCAACGAG
GTGCTGACCC ACTTCGGGAT CGAGCCTCCG GCGAAGCTCG CCCGAACCGT CACCTATCAC
GATCCCTGTC ACCTTCTTCG CGGTCAGGGG ATCAGCGAGG AGCCCCGCGC CCTGATCCGA
CAGGTGGCCG ACCTGGTCGA GATGCCCTCC CAGTGCTGCG GCTCGGGCGG CGGGGTCAAG
GCCGGGAACC CGGCAGAGGC CGAAGCCCTC GGCGAGATGC GGCGATCGGC GATCGAGGGA
TCGGGGGCCA GCGTGGTGAT CAGTTCCTGT CCGTTCTGTG AGTTCCATAT CAGCCAGCAC
ACCGATAAGC CGGTGATGAA CATCGCGACC CTCCTGCTCG AGGGGTACCG CGAGAAGGAC
CGGCAAGAGG CGAAGGGTAC CCCTTCTGCC TGA
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| Protein sequence | MTTMTITVFR QDPAKGEEPR YVPYTIEVNE GARVLHLLHA IHDQIDPTLS YRYCCSSGQC
GSCAVRVDGK PVLACTAEAR DGITIEPLAL PLKKDLMVDL VPLLADLPPL VPGPESVMVT
KRAVEAIRPL STCIGCLACV SICPAMKVTD FLGPTVMRQE MRLALDSRDT CDRATRAVAE
GLFTCTSCQA CWEVCPKEIR IPGKAIEKLR SLANKQGLTL PRHLEVAELV RATGRSVTRT
EPTFLELVPD QIEPYGPVRA TIGFFVGCMY NMRLPKTALD AMEVMKRNGI RVIIPREQVC
CGSPLFRTGQ GKYLAMLVRR NIDAFRFRKI DIVMTMCAGC GSTIKNDYLH VPFKVMDINE
VLTHFGIEPP AKLARTVTYH DPCHLLRGQG ISEEPRALIR QVADLVEMPS QCCGSGGGVK
AGNPAEAEAL GEMRRSAIEG SGASVVISSC PFCEFHISQH TDKPVMNIAT LLLEGYREKD
RQEAKGTPSA
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