| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0335 |
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| Symbol | |
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| ID | 7272639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 358866 |
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| End bp | 359513 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568987 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_002465440 |
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| Protein GI | 219851008 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.734472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCATA TTGATATTCG GATCGAGCAG GATGTCTATG CGGCCAACGA TCGGATCGCC
GATCAAAACG CTGCTCTCCT CCGGGACCAT GGGATCCGGG CGATCGATCT GCTCGGCGCG
ATCGGCTCGG GGAAGACCGC TTTGATCGAG CGTCTGGTCC CATTGCTTGC CGGGCAGGGA
ATCCGAGCCG GGGCGATAGC CGGGGATGTC TACGGGGATG ACGACTTCAA ACGGATCGTT
TCGCTTGGAG TCCCAGCAGT GAACGCGAAC ACTGGTAAGG AGTGCCATCT CGATGCTCAC
ATCGTCGAGC ATGCAATCAG TCACCTCCCT CTCGACCAGC TCGATCTCCT CTTCATCGAA
AACGTCGGAA ACATGGTCTG TCCGACTGAC TTCGCCCTCG GTGCTGAGAA ACGGGTCGTC
GTCGTCTCAT CGACAGAGGG AGATGATGTC GTGAACAAGC ATCCGATGAT GTTCCGCGGT
GCAACGATTG GGGTGATCAA CAAGGTGGAT CTGGCTCCGC TGGTCGGTGC CGACCTCGAC
CGCATGGTTC GTGATATCGC CCGGTATAAC CCAACGATGC CGGTCTTCCG GACCAATTTA
AAGACCGGGG AGGGGACAGA GGCCCTGCTT GAAGAGATCC TGAAGTGA
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| Protein sequence | MHHIDIRIEQ DVYAANDRIA DQNAALLRDH GIRAIDLLGA IGSGKTALIE RLVPLLAGQG
IRAGAIAGDV YGDDDFKRIV SLGVPAVNAN TGKECHLDAH IVEHAISHLP LDQLDLLFIE
NVGNMVCPTD FALGAEKRVV VVSSTEGDDV VNKHPMMFRG ATIGVINKVD LAPLVGADLD
RMVRDIARYN PTMPVFRTNL KTGEGTEALL EEILK
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