Gene Mpal_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0334 
Symbol 
ID7272638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp358541 
End bp358813 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content58% 
IMG OID643568986 
ProductRibonucleoprotein complex SRP, Srp19 component 
Protein accessionYP_002465439 
Protein GI219851007 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1400] Signal recognition particle 19 kDa protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.725093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG AGCGGATTTT GTACCCCTGT TACTTCAACG GAGCCCTGAA ACGGAGCGAA 
GGCCGGCGCG TTCCTCAGTC CCTCGCCCAG AAGGGGCTGC TTTTGGCAGA CCTTGAACGA
GCAGTCAGGA AGAGCGGACT GACCTGCAGA ACAGAACAGA ACCCACACCC GGCATTCTGG
TCCAGGCATG AAGGACGGGT CATGGTCCCG TGGGACCGAT CCAAGGAGAT GCTGCTCAAA
ACAGTGGCCG CCAACCTGCA GGTGAAGCGA TGA
 
Protein sequence
MEKERILYPC YFNGALKRSE GRRVPQSLAQ KGLLLADLER AVRKSGLTCR TEQNPHPAFW 
SRHEGRVMVP WDRSKEMLLK TVAANLQVKR