Gene Mpal_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0333 
Symbol 
ID7272637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp357888 
End bp358544 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID643568985 
Producthypothetical protein 
Protein accessionYP_002465438 
Protein GI219851006 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.789522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC TCTATGACCT GCACACCCAC ACCACGCTCA GCGACGGGGA GATGCTCCCG 
CTGGAACTGC TCAGGAGGAT GTCAGTGCTC GGGTATACGA CCGTCGCCAT CGCTGACCAT
GTGGACACCG CCTCCTCTCC ACTGGTGTTA CCGACGGTCG CCGCAATCAG GGAGTCGGCC
CGCCTCTTTG GGATCAGATT CTTGCCGGCC GTCGAGATCA CCCATGTCCC GCCGGAAGAG
ATCCATGCCC TCGCACAGCG CGCCAGGAAG GAGGGCGCCG AGATCGTCGT GGTCCACGGG
GAGACGGTCG TCGAGCCGGT GCCGGCCGGA ACCAACCATG CGGCCTGCAT CTGCAGAGAT
GTCGATATCC TCGCTCATCC CGGGCTGATC ACCGACGAGG ACGCAGCCCT GGCCGCAGCC
AACAACGTAG CGCTGGAGAT CACCTCGCGC GGCGGCCACA ACCGGACCAA CGGCCATGTC
GTCAGGGTGG CCCAGCGCAC CGGATGCCGG CTCGTTGTGA ACTCCGATGC CCATGCCCCG
CACGATCTCC TCTCAGCCGA AGCAAAGATG GCTGTGGCAC GGGGTGCCGG CCTCTCGGCA
CGCGAGGCCG AAGAGGTACT GGCTTTAAAT ATCGAGGAAC TTGTGCGCAG GCCCTAA
 
Protein sequence
MTGLYDLHTH TTLSDGEMLP LELLRRMSVL GYTTVAIADH VDTASSPLVL PTVAAIRESA 
RLFGIRFLPA VEITHVPPEE IHALAQRARK EGAEIVVVHG ETVVEPVPAG TNHAACICRD
VDILAHPGLI TDEDAALAAA NNVALEITSR GGHNRTNGHV VRVAQRTGCR LVVNSDAHAP
HDLLSAEAKM AVARGAGLSA REAEEVLALN IEELVRRP