| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0318 |
|---|
| Symbol | |
|---|
| ID | 7272619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 346242 |
|---|
| End bp | 346889 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643568968 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_002465423 |
|---|
| Protein GI | 219850991 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.975543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA CAGCAGAGCA ACACCGGGAA CGTCAGGAGA TGGTAAGCAC CCAGATCGCA
GCCCGCGGGA TCACCGATTC CCGATTGTTA ACGGTCCTGA GAACGGTCCC CCGCCACATC
TTCGTCCCTG AGGAGTGGCG GCACCAGGCC TATCTGGATA CACCCCTTCC GATCGGGGAG
GGGCAGACGA TCTCACAGCC GTACATCGTC GCCCTGATGA CAGCCCTGCT TGAACTGAAA
CCCACCGACC GGGTGCTTGA AATCGGCACC GGGAGTGGGT ATCAGGCCGC CATCCTCGGG
CTGCTGGCGG AAACGGTGAT CTCGATCGAA CGAATCCCTG TTGTTGCTGC CCGTGCAGAG
GAACACCTGC GACAGATAGG GCTCACCAAT GTAGAGGTGC TTGTAAAGGA CGGCACCGAC
GGCTATTCCC CTGGGGCTCC GTACGATGCA ATCCTCGCCA CCGCCGGCAC GCCATCAGTC
CCGCCCCCAC TTTTGGAGCA GCTGGCCGAT CACGGCCGGC TCGTCGCCCC GGTCGGGGGA
CAGGACCTGC AGGAGCTCGT GCTGATCCGA AGGGAGGGCG ACCGGTATGA GGAATATCCA
GAAGGGGCGG TCAGGTTTGT ACCGCTGATC GGTGAGCATG GCTGGTGA
|
|---|
| Protein sequence | MDETAEQHRE RQEMVSTQIA ARGITDSRLL TVLRTVPRHI FVPEEWRHQA YLDTPLPIGE
GQTISQPYIV ALMTALLELK PTDRVLEIGT GSGYQAAILG LLAETVISIE RIPVVAARAE
EHLRQIGLTN VEVLVKDGTD GYSPGAPYDA ILATAGTPSV PPPLLEQLAD HGRLVAPVGG
QDLQELVLIR REGDRYEEYP EGAVRFVPLI GEHGW
|
|---|
| |