Gene Mpal_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0315 
Symbol 
ID7272616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp343724 
End bp344980 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content61% 
IMG OID643568965 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_002465420 
Protein GI219850988 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.660935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCG GGTCTTCAGG AATACGGCGC AAATTCGACC AGACACTGGT CGACCTCGCG 
CCAAGGGTCG GTGCTGCCAT GGCGCAGGAC CGACAGACCG TGCTGGTCGG GACGGATACC
CGCACCACCA GCAGGCTCCT TGCAGATGGT GTGATTGCAG GGCTCATCTC TGCCGGGGCA
TCGGTGGATG TCTGCGGGGT GGCGCCGACC CCGACGATCG CGTATGGTGC ACGCACACAG
GGTGCAGGGT GTATGATCAC GGCCTCGCAC AACCCCGAAG CCTACAATGG ACTCAAACTC
TTCAACCCGG ACGGTTCCTC GTATACCCTG GCCCAGCAGC AGGAGATCGA GGAAATGCTG
AAAGGAGAGG ACCGGTGGGC AGCATGGAAC AAACAGGGAC GGTTGCGGCA GGTGGATGCT
ATCGCCGTTC ACACTGAAGC GATCCTCGAT CAGATCACCC CAAAGAAGGA GATCACCGCC
ATCGTGGATT GTGGGAACGG GGCGGGATGC ACCGTCACCC CCGATCTGCT CAAAAGAGCA
GGGGTGAAGA CGATCTGTCT GAACTGCAAT CCGCGGGGAA GGTTTGCCCG TCCATCAGAA
CCACTTAAAG AGTCGTTTCC CTACCTCCCC GACCTGATCC GAAAACGCGG CGCGACCTGT
GCGGTGATGC ACGACGGTGA TGCAGACCGG ATGATGGCCT TCGATGATAA GGGGCGGTAT
ATCGGCGGCG ACCACATGCT GATGCTGCTG ACCAAATACC TGGGCGCCGC CCATGTGGTC
ACCACCTCAG ACGCCTCGAT GGCGATCGAA GAGATCGCAG AGGTGCGGAG GACCCCGGTC
GGGGACAGTT TCGTCTCCGA GGAATTGCTC AGGTGGGGCG AGTTTGGCGG AGAACCCTCC
GGCGCCTGGG TCTTCCCCGA CATATCGCTC TGCCCGGATG GTCCGTATGC GGCGGCCCTC
CTCTGTGAGA TCGCCAGTGA GTGGAAGATC TCAACGGTGA TCGACGAGAT GCCGAACTAC
CCGATCCTGC GCGAATCCGT GCAGGTCGAT GATGCACGGG GGATCCTGAC CAGACTCGGC
GCAGAGAACC CGACCGATGG GCTTCGAATC GAGGAAGAGG GTGGATGGTG CCTGATCAGG
GCCAGTGGTA CCGAGCCGAA GGTCAGGCTG ACAGCAGAGG GAACGACCCC GACCAGAGCA
AAGGCGATGC TCGTCAGAGG GCAGGACCTG CTGAAGAAGG GAAGAGCAAA GGAGTGA
 
Protein sequence
MLFGSSGIRR KFDQTLVDLA PRVGAAMAQD RQTVLVGTDT RTTSRLLADG VIAGLISAGA 
SVDVCGVAPT PTIAYGARTQ GAGCMITASH NPEAYNGLKL FNPDGSSYTL AQQQEIEEML
KGEDRWAAWN KQGRLRQVDA IAVHTEAILD QITPKKEITA IVDCGNGAGC TVTPDLLKRA
GVKTICLNCN PRGRFARPSE PLKESFPYLP DLIRKRGATC AVMHDGDADR MMAFDDKGRY
IGGDHMLMLL TKYLGAAHVV TTSDASMAIE EIAEVRRTPV GDSFVSEELL RWGEFGGEPS
GAWVFPDISL CPDGPYAAAL LCEIASEWKI STVIDEMPNY PILRESVQVD DARGILTRLG
AENPTDGLRI EEEGGWCLIR ASGTEPKVRL TAEGTTPTRA KAMLVRGQDL LKKGRAKE