| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0287 |
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| Symbol | |
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| ID | 7272587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 319122 |
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| End bp | 320393 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568937 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_002465393 |
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| Protein GI | 219850961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
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| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.213046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG AACCAGTGAT CGATGAGGCA CGCCGCCGCT ATGATTTTAA AAAGACCCTC
GAGAAACTTG AGGCCAAGGA GGGGAGCGGG ACCGAACTGA TCACGCTCTA TATCCCTCCG
GATAAGCAGA TCTACGACGT GACCGCCCAG CTGCGGGACG AGTTCGGGCA GTGCTCGAAC
ATCAAGAGCA AGCAGACCAG GACCAATGTG CAGAGCGCGA TCTCCTCGAT CCTCTCGCGA
CTTAAATACT ACAAACGGCC CCCCGAGAAG GGTATGGCGA TCTTCTGCGG TACGATCCTG
CTTGGTGGGG ACCGAACAGA TCTCGAGTGT ACGGTCATCG AGCCGCCTGA ACCGCTGAAC
CTGTACATGT ACCGCTGTTC TTCGAACTTC GAGCTCGAAC CCCTCCGGGA GATGCTCGAG
GAAAAATCGG TGTACGGGCT GCTCGTGCTG GACCGGCGTG AATCCTACTG GGGTTTTCTC
CGCGGTAACC GGATCGATCC CATCGGCGGG TCGACCTCGA CGGTTCCGGG CAAGCAGCGG
AAAGGGGGTC AGTCATCGGC TCGTTTCCAG CGACTTCGTG AGATCGCCAT CAACGAATTC
TATAACAAGG TCGGCGAACG GTCGAGTGCG GTCTTCCTGG CAGAGAAGGA CTTCTTCGAG
CGGTTCAAAG GGGTGCTGAT CGGTGGACCG TCTCCGACAA AGGAGGAGTT CGAGGCCGGC
AACTACCTCC ACCACGAGGT TCAGAAGCGG GTGATCGGCC TCTTCGATAT CTCCTATACC
AACGAGAGCG GCCTCGCCGA ACTGGTCGAC GCAGCGCAGG ACGCCCTGAA GGGTGTCGAG
GTGATGAAGG AGAAGGCGGT GATGAACCGG TTTCTCAAGG AACTGGTGAA GGACGACGGA
GTCGCCGCCT ATGGTGAGGC TTCGGTCCGG AAGAACCTTG AGCTCGGCGC CGTCGAGACC
CTGATCCTCT CGGCAAGTCT TCGGGAGGTC CGGCTGAAGA CCTCCTGTCA TGCCTGCGGC
TATACCAACG AGATGACCGT GAAGACAGCC CCGGGCGAAC ATACGCAGAA CCGAGACCTC
GGCAACTGCC CCGACTGCAG CGCCCCCCTT GAACTGGCAG AAGAGAACGA TATCATCGAT
GAACTGACCC TGCTGGCAGA CCAGTCCTCC ACCAAGGTGG AGATCATATC AGACGACTTT
GAGGAGGGTT CGATCCTGTA CACTGCGTTC GGCGGGATCG CGGCACTCCT CAGATACAGG
ACCGGATACT GA
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| Protein sequence | MNEEPVIDEA RRRYDFKKTL EKLEAKEGSG TELITLYIPP DKQIYDVTAQ LRDEFGQCSN
IKSKQTRTNV QSAISSILSR LKYYKRPPEK GMAIFCGTIL LGGDRTDLEC TVIEPPEPLN
LYMYRCSSNF ELEPLREMLE EKSVYGLLVL DRRESYWGFL RGNRIDPIGG STSTVPGKQR
KGGQSSARFQ RLREIAINEF YNKVGERSSA VFLAEKDFFE RFKGVLIGGP SPTKEEFEAG
NYLHHEVQKR VIGLFDISYT NESGLAELVD AAQDALKGVE VMKEKAVMNR FLKELVKDDG
VAAYGEASVR KNLELGAVET LILSASLREV RLKTSCHACG YTNEMTVKTA PGEHTQNRDL
GNCPDCSAPL ELAEENDIID ELTLLADQSS TKVEIISDDF EEGSILYTAF GGIAALLRYR
TGY
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