| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0283 |
|---|
| Symbol | |
|---|
| ID | 7272583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 316381 |
|---|
| End bp | 316989 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643568933 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002465389 |
|---|
| Protein GI | 219850957 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0602] Organic radical activating enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.173391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.103255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA GTGAGATCTT TCTCTCCCTG CAGGGAGAGG GAGTCTATCA GGGAAAGGCC
TGTATCTTCA TCCGGCTCTC CGGCTGCAAC CTCTCCTGTT CCTGGTGCGA TACCCGGTAC
GCCTGTACTC TGGGGGAGGA GATGACCACC GAGCAGGTGC TGGAGCGGGT GAGTGAGGAG
AATTGTTCCC TGATCTGTAT CACCGGCGGG GAGCCGCTGC TCCAGCAGGA TCAACTTCTT
CCGCTGCTGA AGGCTCTTGA GGACCGCGGG TATATTGTCG GGATCGAGAC CAATGGAACT
ATCGATTTCA TCGCATCGGG GGAGTATGCC TCGATCTGTA TGGACGTTAA ATGCCCATCC
TCAGGTGAAA CATCCGACCT CTCCCTCCTT GAACACATTC GTGTCACCGA CAGCGTGAAA
TTCGTGGTCA AAGACCAGCA GGACTGTGCC TATGCCGAAT CGGTGATCCG GGACCATCCG
ATCAAAGGGA CGATATTCTT CTCGCCGGTC TTTGGATCAG AATATACCGC CCTCGCCTCG
TTTGTGCTGA CCCGCCATCT GCCGGTCACG TTTCAGATGC AACTTCACAA GATCATCGGA
GTGAAATAA
|
|---|
| Protein sequence | MKISEIFLSL QGEGVYQGKA CIFIRLSGCN LSCSWCDTRY ACTLGEEMTT EQVLERVSEE
NCSLICITGG EPLLQQDQLL PLLKALEDRG YIVGIETNGT IDFIASGEYA SICMDVKCPS
SGETSDLSLL EHIRVTDSVK FVVKDQQDCA YAESVIRDHP IKGTIFFSPV FGSEYTALAS
FVLTRHLPVT FQMQLHKIIG VK
|
|---|
| |