| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0280 |
|---|
| Symbol | |
|---|
| ID | 7270392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 314754 |
|---|
| End bp | 315368 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643568930 |
|---|
| Product | 30S ribosomal protein S7P |
|---|
| Protein accession | YP_002465386 |
|---|
| Protein GI | 219850954 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0531447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.094163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA TCGAGAACGT AACCACAGAG ACAGAAACGA CCCCCACCCC GAGCAGAAAA
CTGCTCTTCA ATCAGTGGGA CCTTGCCGAA GTGCAGATCA CCGACCCTTC CCTTGTGCGG
TATGTGAACC TGCACTCCAT GATTGTGCCC CATTCATGTG GCAAACTTGC AGGGACTGAC
TTCAACAAGA GCAATATGCT GATCGTCGAG CGGCTGATCA ACCGGCTGAT GCAGACCGAA
CAGAACACCG GCAAGAAGCA GCTGGCCATC AGGATCGTCA GGGACGCCTT TGGGATCATC
GCCAAGAAGA CCAAGAAGAA CCCTGCACAG GTGCTCGTCG ACGCGGTCGC AAACAGCGGT
CCCCGTGAAG AGACGGTCAG GCTGAAGTAC GGTGGCATCA ACGTGCCCAA GGCAGTCGAC
ACCGCCCCCC AGCGCAGGGT TGACGGCTCG CTGAAGTTCA TCACCGAAGC GGTCTACAAG
GCATCCCGTA AGACAAAGAA GAGTGTCTCA TCTGCACTTG CAGATGAACT GATGTCAGCG
GCACGCGGTG ACGCGAAGGC CTATTCAGTG GCAAAGAAAG AAGAACGCGA ACGGATTGCA
AAATCCGCAC GATAA
|
|---|
| Protein sequence | MEEIENVTTE TETTPTPSRK LLFNQWDLAE VQITDPSLVR YVNLHSMIVP HSCGKLAGTD
FNKSNMLIVE RLINRLMQTE QNTGKKQLAI RIVRDAFGII AKKTKKNPAQ VLVDAVANSG
PREETVRLKY GGINVPKAVD TAPQRRVDGS LKFITEAVYK ASRKTKKSVS SALADELMSA
ARGDAKAYSV AKKEERERIA KSAR
|
|---|
| |