Gene Mpal_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0276 
SymbolaspC 
ID7270662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp309950 
End bp311224 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content58% 
IMG OID643568926 
Productaspartyl-tRNA synthetase 
Protein accessionYP_002465382 
Protein GI219850950 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00458] aspartyl-tRNA synthetase, archaeal type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.825519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0515274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCC CTGATACAGA GCATGCGAAG ATCATCGGGT GGGTCCATGA GGTCAGGGAC 
CTCGGCGGCC TGGCCTTCTT CCTGATCAGG GATCGAACAG GGATCATCCA GGTGACCATC
CCAAAGAAGA AAGCATCAGA AGAGGTCCTC GCAGCCATCA AAGGGGTCTC CCGCGAGTCG
GTCGTACAGG TGACCGGCCA GGTGAAAGCA ATGGAAAAAG CGCCGGGCGG CCGCGAACTC
CTGCCATCCT CGTTCGATGT GTTGAGCAGA AGCGACAGCC CGCTGCCCCT CGACGTGGTC
GAAAAGGTGC CAGCCGATCT GGACACCAGG CTTGACGTCA GATTCTTAGA TGCACGCCGG
CCCCGGGTGG CCGCGGTATT TGAGATCCGG TCGGCAGTCC TCCATGCAGT CCAGCAGTTC
CTTCATAAGC GGGAGTTCAC CCAGATCACC ACCCCAAAGA TCGTGGCAGC AGCCACCGAG
GGAGGGACCG AACTCTTCCC GATCGCCTAC TTTGAGAAGG AGGCGTTTCT GAACCAGAGC
CCGCAGTTGT ACAAACAGAT GATGATGGCC GCCGGATTTG AGAAGGTCTA TGAGATTGGC
CCGATCTTCC GTGCAGAGGA GCACAACACC ACCAAGCATC TCAACGAGGC AACTTCGATC
GATGTCGAGG TCTCATTTGC CGATCATTAC GACATGATGA CACTCCTTGA GGAGATGATC
ATCACCACGT ACGAGCATAT CTCCCAGACC TGTCAGGACC AGCTCGCCAA CCTTGAGATC
GAGGAGTTCG AGGTGCCAAA GGGACCGTTC ACGAGGTTGC CGTATGCAGA GGCGATCGAG
ATCGCCGCAA AGAAGATCGA TGAACCGATC AAATACGGCG ACGATCTCGG CTCTGCTGCA
GAGCGGGCGG TTGGAGAAGA GATGGGAGCC CACTACTTCA TCACGGACTG GCCGAGTTCA
ATCCGGCCGT ATTATGCGAT GCCCTACGAG GACGATCCCT CCATCTGCAA GGCATTCGAC
CTGATGCATC CGCGGATGGA ACTCTCAAGT GGGGCGCAGC GGGTCCACCA GTACGACCTG
CTCGTATCAC AGATCATCGC CAAAGGACTC TCTCCAGAGA GTTTCGAGTT CTACCTTCGA
CCGTTCCGAT ATGGGATGCC TCCGCACGCC GGATTCGGTG TCGGTGCCGA GCGGCTCGTG
ATGACGATGC TTGGGCTGCA GAATATTCGA GAAGCCGTGC TCTTCCCGCG TGACCGCCAC
CGGCTGGTCC CCTGA
 
Protein sequence
MVTPDTEHAK IIGWVHEVRD LGGLAFFLIR DRTGIIQVTI PKKKASEEVL AAIKGVSRES 
VVQVTGQVKA MEKAPGGREL LPSSFDVLSR SDSPLPLDVV EKVPADLDTR LDVRFLDARR
PRVAAVFEIR SAVLHAVQQF LHKREFTQIT TPKIVAAATE GGTELFPIAY FEKEAFLNQS
PQLYKQMMMA AGFEKVYEIG PIFRAEEHNT TKHLNEATSI DVEVSFADHY DMMTLLEEMI
ITTYEHISQT CQDQLANLEI EEFEVPKGPF TRLPYAEAIE IAAKKIDEPI KYGDDLGSAA
ERAVGEEMGA HYFITDWPSS IRPYYAMPYE DDPSICKAFD LMHPRMELSS GAQRVHQYDL
LVSQIIAKGL SPESFEFYLR PFRYGMPPHA GFGVGAERLV MTMLGLQNIR EAVLFPRDRH
RLVP