Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0276 |
Symbol | aspC |
ID | 7270662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 309950 |
End bp | 311224 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643568926 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002465382 |
Protein GI | 219850950 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.825519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0515274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACCC CTGATACAGA GCATGCGAAG ATCATCGGGT GGGTCCATGA GGTCAGGGAC CTCGGCGGCC TGGCCTTCTT CCTGATCAGG GATCGAACAG GGATCATCCA GGTGACCATC CCAAAGAAGA AAGCATCAGA AGAGGTCCTC GCAGCCATCA AAGGGGTCTC CCGCGAGTCG GTCGTACAGG TGACCGGCCA GGTGAAAGCA ATGGAAAAAG CGCCGGGCGG CCGCGAACTC CTGCCATCCT CGTTCGATGT GTTGAGCAGA AGCGACAGCC CGCTGCCCCT CGACGTGGTC GAAAAGGTGC CAGCCGATCT GGACACCAGG CTTGACGTCA GATTCTTAGA TGCACGCCGG CCCCGGGTGG CCGCGGTATT TGAGATCCGG TCGGCAGTCC TCCATGCAGT CCAGCAGTTC CTTCATAAGC GGGAGTTCAC CCAGATCACC ACCCCAAAGA TCGTGGCAGC AGCCACCGAG GGAGGGACCG AACTCTTCCC GATCGCCTAC TTTGAGAAGG AGGCGTTTCT GAACCAGAGC CCGCAGTTGT ACAAACAGAT GATGATGGCC GCCGGATTTG AGAAGGTCTA TGAGATTGGC CCGATCTTCC GTGCAGAGGA GCACAACACC ACCAAGCATC TCAACGAGGC AACTTCGATC GATGTCGAGG TCTCATTTGC CGATCATTAC GACATGATGA CACTCCTTGA GGAGATGATC ATCACCACGT ACGAGCATAT CTCCCAGACC TGTCAGGACC AGCTCGCCAA CCTTGAGATC GAGGAGTTCG AGGTGCCAAA GGGACCGTTC ACGAGGTTGC CGTATGCAGA GGCGATCGAG ATCGCCGCAA AGAAGATCGA TGAACCGATC AAATACGGCG ACGATCTCGG CTCTGCTGCA GAGCGGGCGG TTGGAGAAGA GATGGGAGCC CACTACTTCA TCACGGACTG GCCGAGTTCA ATCCGGCCGT ATTATGCGAT GCCCTACGAG GACGATCCCT CCATCTGCAA GGCATTCGAC CTGATGCATC CGCGGATGGA ACTCTCAAGT GGGGCGCAGC GGGTCCACCA GTACGACCTG CTCGTATCAC AGATCATCGC CAAAGGACTC TCTCCAGAGA GTTTCGAGTT CTACCTTCGA CCGTTCCGAT ATGGGATGCC TCCGCACGCC GGATTCGGTG TCGGTGCCGA GCGGCTCGTG ATGACGATGC TTGGGCTGCA GAATATTCGA GAAGCCGTGC TCTTCCCGCG TGACCGCCAC CGGCTGGTCC CCTGA
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Protein sequence | MVTPDTEHAK IIGWVHEVRD LGGLAFFLIR DRTGIIQVTI PKKKASEEVL AAIKGVSRES VVQVTGQVKA MEKAPGGREL LPSSFDVLSR SDSPLPLDVV EKVPADLDTR LDVRFLDARR PRVAAVFEIR SAVLHAVQQF LHKREFTQIT TPKIVAAATE GGTELFPIAY FEKEAFLNQS PQLYKQMMMA AGFEKVYEIG PIFRAEEHNT TKHLNEATSI DVEVSFADHY DMMTLLEEMI ITTYEHISQT CQDQLANLEI EEFEVPKGPF TRLPYAEAIE IAAKKIDEPI KYGDDLGSAA ERAVGEEMGA HYFITDWPSS IRPYYAMPYE DDPSICKAFD LMHPRMELSS GAQRVHQYDL LVSQIIAKGL SPESFEFYLR PFRYGMPPHA GFGVGAERLV MTMLGLQNIR EAVLFPRDRH RLVP
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