| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0275 |
|---|
| Symbol | |
|---|
| ID | 7270661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 309045 |
|---|
| End bp | 309941 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643568925 |
|---|
| Product | methionine synthase |
|---|
| Protein accession | YP_002465381 |
|---|
| Protein GI | 219850949 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.103255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGA CTGATCTGCT GCTACCGACA ACAGTCGTCG GGAGTTACCC CGTCGTCAGG
GGAAAGGGGC TGCGTGCCCT CCTCGATCCC CTCCGCCCGG CCCTCGAAAC AGCCATCAAC
GACCAGGTGA ACGCCGGGGT CGACATCATC TCTGATGGGC AGGTCAGAGG CGAGATGATC
CAGATCTTCA CCACCCATCT CCCGGGGGTT CGGGGGCAGC AGGTGATCGG GAAGGTGCTG
CCTGCGGCCG GATCGATCAC GGTGCACGAT ACCCGGTTCG CGCTGACAAA GACTCGATAT
GTGAAGGGGA TCCTGACCGG ACCGTCGACG CTTGCCCATG GGCTGCAGCT GGCGACCCCT
CACTACAGGT CCAGGGAGGA ACTGGTCCCA GACATCGCAA CCGCCCTGGT CGTCGAGGCG
ATCGCCCTTG AGGAGGCCGG CGTTGCAATG ATTCAGATCG ACGAACCGAT CTTCTCGACC
GGTGCCCCCG ATCTGGATAT CGGGGGGCGA GCGGTGGAGC TGATCGCAGA TCAGGTCTCC
GTACCGGTAG CGCTCCACAC CTGCGGAGAT CTCTCACAGG TAATCGACCG GATCCTCTCG
ATCCGGGTCG ACATCCATGA CTGTGAGTTC GCGACCTGCC CGGCCAACCT GGACCTCTTC
TCAGCCAGGG ATCTCGGGAA GAAAAAGATC GGACTCGGGT GCCTGGACTC GTCCTCAGAT
TCAGTCGAGA GCGTCGACGT GATCGCCCGG CTGATCAGAA ATGGCGTCGA TCGGTTCGGA
GCCAATCGGC TGCTGATCGA TCCCGACTGT GGGATGCGGA TGCGGATCAG GGAGGCCGCA
TCTGCCAAAC TTGTACATAT GGTCGAAGCG ACCGGGATTG TCCGGAGCGA ACTCTAA
|
|---|
| Protein sequence | MPLTDLLLPT TVVGSYPVVR GKGLRALLDP LRPALETAIN DQVNAGVDII SDGQVRGEMI
QIFTTHLPGV RGQQVIGKVL PAAGSITVHD TRFALTKTRY VKGILTGPST LAHGLQLATP
HYRSREELVP DIATALVVEA IALEEAGVAM IQIDEPIFST GAPDLDIGGR AVELIADQVS
VPVALHTCGD LSQVIDRILS IRVDIHDCEF ATCPANLDLF SARDLGKKKI GLGCLDSSSD
SVESVDVIAR LIRNGVDRFG ANRLLIDPDC GMRMRIREAA SAKLVHMVEA TGIVRSEL
|
|---|
| |