| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0273 |
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| Symbol | |
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| ID | 7270659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 304907 |
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| End bp | 307660 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643568923 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002465379 |
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| Protein GI | 219850947 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.161492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATCT CCCCCCAGGG CAGGTCACTG CTCTGTTCTC TGCTCTGTGC GCTGGTCTTC
TTGACCATGA CCCCAGCCGT TGCTGGGGCA TATCCTCAAA CTCAGTCAGT GCTGATCATT
CATTCATACC ACCAGGGGTT CGCCTGGACC GACGAAGTGA CCACCGGAAT CAACGAGGTG
CTCACTCCAA ACGGAACCCT GGATATGCCG GTCGAGTTCA TGGATACCAA ACGGTACCAT
GATGAGGCCT ACTTCAGAGC CCTCTTCTCA TTCTATCAGG TGAAGTACGC AGGCAAACCA
CCGGATCTGA TCCTCGCCGA CGAAGAGGAT GCCTATAATT TCCTCCTTCA GCATCATGAC
GTCCTCTTCC CCGGAGTCCC GGTGGTCTTC ATCGGGGTGA ACTATGTGCC AGGGACAGCC
CAACCACCCC GCCCTGACTT CACTGGTGTG CTTGAGGACT ACCAGATCAA CCGGACCATC
GACCTCGCCC TCCGCCTCCA TCCTGGGACC AAAAACCTGG TGATCATCAA CGATAACGTC
ACCTCGGCTG GGGTGGCCAA CCAACAGATC CTCAAACCGG TCCTCCCGGC CTATGCAGAG
AGGATGAATA TCAGGTTCAT CAGCAATGTG ACCCTGCAGG AACTGGGGGA CCAGGTGGCT
GCCATCGATA AAGACAGTAT CGTTCTCCTC CTCACCTTCA ACCAGGACCG GGAGGGAAGG
ACGGTCTCTT ACGATGAGAG CGCCGCAACA ATCGCAGCGA ACTGCAACGT CCCGGTCTAT
GGGGTCTGGG ACTTTTATCT CGGAAAGGGG ATCGTTGGCG GGATGATGAC GACCGGTGAG
ATTCAGGGAA AGATTGCCGG TCAGATGGCG CAGGAGATCC TTGCAGGGAG GAATGTCACC
GATATCCCGG TGACGATCGC ACGCCCCGAC GCCGGGATCT TCGATTATCA GCAACTCCAG
CGTTTCAACA TCGACCCGAT TGATCTCCCT GCTGGGAGTG TGATCATCAA TCAGCCATCC
AACATGATGG TGTTTCCAAA AATGACCGTG ATGGTAACCA TCCTTCTCTG TATCGGTCTC
TTCGTCATCA TCCTTGCTCT CTTCACCACC AACCGTCGTA CCCATACCGC TCGCGAACGG
CTCAGGATCA GTGAGGAGCG TTTCCGGAGT ATCTTCGACC TCCCCCTGAT AGGGATCGCC
ATCATCGCAT CGGGGGGCCA GATGTTAATG GCGAACAAGA GACTCTGTTC GATCACCGGG
TTCTCCCATG CCGAGGTGAT GAAGAGGACC TGGCGTGACC TCTCATTGCA GGAAGACCTT
CCTGGGGAGG AGGCGAGGAT AGCAGAGATG TACCGGGGAG AGCAGGAGAC CTTCTCGGTT
GAGAAGCGGC TGATCCGTCA GGACGGCCAG GTGATCGCCA TCGAGGAGGC AGTGGCCGTT
GTGAAGCATA CAGACGGATC AGCCGACTAT TTTGTCGTGG TGATCAGCGA TATCACCCGA
CGTAAACAGG TGGAGGAAGA ACTGCACCAG CATCAACAGC ATCTTGAGGA ACAGGTGATG
AGGCGGACGG CCGACCTGGA GACGGCGATA GCAAGATTGA CCACCGAGGT CCAAGAGCGG
AGGCGAACAG AGACTCTTCT TGCAGCCGAG AAGGAACGGC TGGCCATCAC CCTCCAGTCC
ATCGCCGACG GGGTGATCAC CACCGACGCT GCAGGGCTGG TCCGGATGAT GAATCCAGTG
GCAGAGGAAC TGACCGGTTG GCGGCAGGAA GAGGCGATGG GTCTGCCGCT CGCCCGGGTC
TTCGTCACTG GAGACGAAGT CCCCCGGGAC GAAACTGAAC CATCCCCATC CATAGCAGTA
CAGAGTTCCG GTACCCCCTC CCGGCTCTGG GGGAGCCGAC TGCTCAGAAC TGATGGAACC
TGGCACACGA TCGCTGCCAG TTCAGCCGAG GTTCCAGGTC ATGAAGGAGA TCAGGGTGGA
TCCATCATCG TCTTCCAGGA TATCACATCC CTTCGACAGA TGGAAGAGGA GTTGCTCAGA
AATCAGAAAA TCGAATCGCT TGGGGTACTG GCCGGAGGGA TCGCCCATGA TTTTAACAAT
ATTCTGACGA TCATTGTCGG GCATTTGGAA CTTGCCGGGA TGGACCTCGC TGATGACGAT
CCTGTCACGC TCCAGCTCAA CAAGGCGACC CGGGCACTCT TCCGTGCACG GGGGTTGACT
ACGCAACTCC TCACCTTCGC CCAGGGCGGT GCGCCGGTCA GAACGGTTTC GTACCTCTCC
GATATGATCG AGGAGACAGC CACCTTCGCT CTCAGGGGAT CGAAGTCCCG AGCACTCTTC
CGACTTTCAG CGTCCCTACC TGCCGTCGAC GTGGACCTCG ACCAGATCAG CCAGGTGGTC
AGCAACCTCG TGATGAACGC TGACCAGGCG ATGCCGGCAG GGGGGACGGT GATCATCACC
GGGGAGGTAG TGACCCAGGC AAAAGGAACT CTCTCCCTCC CTTCCGGAGA GTACGTGGCA
ATATCGGTGG AGGATACCGG GATCGGAATT CCCTCTGATT TGATGGGGAA GATATTCGAC
CCATATTACT CGACTCATTC TGTCGGGCGG GGACTCGGTC TCTCCAGCAG CCTCTCGATC
ATCAGGAACC ATGGTGGAGG GATCGAGGTC CACTCTGTCA TCGGAGAGGG GAGCACCTTT
ACGTTCTACC TCCCGGTGAA CGGTTCGAGG TCACCTGGTA CCAACACGGT CTGA
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| Protein sequence | MWISPQGRSL LCSLLCALVF LTMTPAVAGA YPQTQSVLII HSYHQGFAWT DEVTTGINEV
LTPNGTLDMP VEFMDTKRYH DEAYFRALFS FYQVKYAGKP PDLILADEED AYNFLLQHHD
VLFPGVPVVF IGVNYVPGTA QPPRPDFTGV LEDYQINRTI DLALRLHPGT KNLVIINDNV
TSAGVANQQI LKPVLPAYAE RMNIRFISNV TLQELGDQVA AIDKDSIVLL LTFNQDREGR
TVSYDESAAT IAANCNVPVY GVWDFYLGKG IVGGMMTTGE IQGKIAGQMA QEILAGRNVT
DIPVTIARPD AGIFDYQQLQ RFNIDPIDLP AGSVIINQPS NMMVFPKMTV MVTILLCIGL
FVIILALFTT NRRTHTARER LRISEERFRS IFDLPLIGIA IIASGGQMLM ANKRLCSITG
FSHAEVMKRT WRDLSLQEDL PGEEARIAEM YRGEQETFSV EKRLIRQDGQ VIAIEEAVAV
VKHTDGSADY FVVVISDITR RKQVEEELHQ HQQHLEEQVM RRTADLETAI ARLTTEVQER
RRTETLLAAE KERLAITLQS IADGVITTDA AGLVRMMNPV AEELTGWRQE EAMGLPLARV
FVTGDEVPRD ETEPSPSIAV QSSGTPSRLW GSRLLRTDGT WHTIAASSAE VPGHEGDQGG
SIIVFQDITS LRQMEEELLR NQKIESLGVL AGGIAHDFNN ILTIIVGHLE LAGMDLADDD
PVTLQLNKAT RALFRARGLT TQLLTFAQGG APVRTVSYLS DMIEETATFA LRGSKSRALF
RLSASLPAVD VDLDQISQVV SNLVMNADQA MPAGGTVIIT GEVVTQAKGT LSLPSGEYVA
ISVEDTGIGI PSDLMGKIFD PYYSTHSVGR GLGLSSSLSI IRNHGGGIEV HSVIGEGSTF
TFYLPVNGSR SPGTNTV
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