| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0262 |
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| Symbol | |
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| ID | 7270648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 291106 |
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| End bp | 293538 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643568913 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_002465369 |
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| Protein GI | 219850937 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.766214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTA AGGTGATGCC GGAAATATAT CTGAAGGTGG ACAGTGCCTA TCCCGAGGAC
CAGGGAGGCG GAAAGGCACG TCTGGACCCT GAGACGATGC TCCAGCTTCG TGTCTCACCA
GGTGATATCG TGATGATCGA GGGGAGGCGC AGGACCGTCG CCAAGGTCTG GCGTGCCCTG
GTCACTGACT GGAACCAGGG GAAGATCAGG ATCGACAACC TGACCCGTGC CAATGCCGGT
GTGAGTATAG GGGATCGGGT CAGGATCACC TCTATCACCG ATGAGATCGA GGCGAAACGG
GTCGTGCTGG CCCCGCCTGA GGATCTTCCA CATAATATTC CGATCAACTA CGATCATGCG
ATCAACGGTC TGATCGACTT TCCGATGATG ATGAACGACT CGGTCCCGAT CAGGCAGGGG
TTCCCGTTCA TGCAGCCGCA GATCATCGCT TTCAAGGCGG TCGTCGTCGA GCCCGAGGAG
GCGGTGATCA TCACCCGGAA TACCGAGATC GAATTCAGCG AGAAACCGGC CGTCGGGTTT
GAAGGGTTGA AGCGAATCTC ATACGAGGAC ATCGGCGGGC TCAGTTACGA GCTGCAGCGG
GTTCGTGAGA CGATCGAGCT GCCGATGCGC CACCCGGAAC TCTTCCGGAA ACTCGGGATC
GAGCCGCCGA AGGGTGTGCT GCTGTACGGC CCGCCCGGCA CCGGCAAGAC ACTGATCGCA
AAGGCGGTGG CCAGCGAGAG CGGTGCCCAT TTCATCGCGA TCGCCGGGCC TGAGGTGATC
TCCAAGTACT ACGGTGAGAG CGAACAGCGG CTTCGCGAGG TCTTTGAGGA GGCCCGCGAG
AACGCTCCGG CGATCATCTT CATCGACGAA CTCGACTCGA TCGCACCACG GCGCGAGGAC
GTGACCGGCG AGGTGGAGCG GCGGGTCGTG GCCCAGTTGC TGACGATGAT GGACGGGCTT
GAGGAGCGGG GCGAGGTCGT GGTGATCGGA GCCACAAACC GGGTCGATGC GATCGATCCC
GCACTCCGCC GTCCCGGCCG GTTCGATCGG GAGATCGAGA TTGGGGTGCC CGGCGAGGGT
GACCGGGCCG AGATCATGAA GATCCATACC CGGGGGATGC CGCTCGCCCC TGACGTGAAC
GTCGACGACC TGGCCCAGCA GACCTTCGGG TTCGTCGGTG CCGACCTGGC CGCTCTGGCC
CGTGAGGCCG CAATACGGGC ACTCCGGCGA TACCTGCCGG ATATCGACCT GGAGGTCGAC
GAGATCCCTG AGGACATACT CGACCGGCTC GAGGTCCAGA GCCGGGACTT CCGGGCGGCC
CATCGGGACG TCGGCCCGAG TGCCATGCGG GAGGTGATGC TCGAGGTCTC GCATGTGACC
TGGGCTGACG TCGGTGGTCT CGAAGCAGCC AAGCAGGAGG TTCGGGAGGC CGTCGAGTAC
CCGCTGACCG ACCGCACCCG GTTCGAGGTG CTCGGGATCG AGCCACCGAA GGGTGTGCTG
TTGTACGGCC CGCCCGGCAC CGGCAAGACG CTGATCGCGA AGGCCGCAGC CCATGAGAGC
GGAGCCAACT TCATTCCGGT CCGGGGTCCG CAGCTCCTCT CCAAGTGGGT CGGCGAGAGC
GAGCGGGCTG TTCGAGAGAT CTTCAAGAAG GCCCGGCAGG TCGCCCCGTC GTTGATCTTC
TTCGACGAGA TGGACGCGCT CGCCCCGACC AGGGGAGGCG GGTCCGACTC GCATGTGATC
GAGAGCGTTC TGAACCAGAT CCTGACCGAG ATGGACGGTC TGCAGGAGCT CAAGGACGTG
GCCGTAATGG GGGCCACGAA CCGGCCCGAC ATTGTCGACC CAGCCCTCCT CCGGCCCGGC
CGTTTCGACC GGCTCGTCTA TATCGGAGAA CCCGGGCCTG ATGACCGGAA GATGATCCTT
CGGATCCACA CCCGGCTGAT GCCGATCGAG GGATCCCCGA TGGAGGATCT GGTGGCCGAC
ATCGAAGGTA TCGGTGAGCA GGAGATGGAG GCTGCTGTGA ACCGCCTCGG TAAGGGAAGA
ACCTTCACCC TTGAGGAGGC GAAGGCCGTC TTCGCTGGCA TCCCGCGGGA GAGTAAAGAG
AAGATCTCCT CAATTGATCT CCGTCGGCGG CTGGTAGAGC ATCTGGTCTC CCGCCGGCTG
GTTCTGCAGG ATCCTGCCCG GGATGAGTTG ATGGCCACCC TTTCAGCACA GACCGAGGGT
TTTGTCGGTT CCGACCTTGA GGCCCTCTGC AGGGAGGCAG GGATGTTCGC CCTTCGGGAA
GGGGCCACCA CCCTGGCCCC CCGTCACTTC ACTGCAGCGG CGGCGAAGGT GCATGCAACG
ATGAACCAGC GGGTCCGGGA CTATTATCAG AAGATCCAGC AGTTCTTCAA GGGCGGTCTC
CCGCAGGAAG TCCAGCCTCC CGAGTATCAG TAG
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| Protein sequence | MMVKVMPEIY LKVDSAYPED QGGGKARLDP ETMLQLRVSP GDIVMIEGRR RTVAKVWRAL
VTDWNQGKIR IDNLTRANAG VSIGDRVRIT SITDEIEAKR VVLAPPEDLP HNIPINYDHA
INGLIDFPMM MNDSVPIRQG FPFMQPQIIA FKAVVVEPEE AVIITRNTEI EFSEKPAVGF
EGLKRISYED IGGLSYELQR VRETIELPMR HPELFRKLGI EPPKGVLLYG PPGTGKTLIA
KAVASESGAH FIAIAGPEVI SKYYGESEQR LREVFEEARE NAPAIIFIDE LDSIAPRRED
VTGEVERRVV AQLLTMMDGL EERGEVVVIG ATNRVDAIDP ALRRPGRFDR EIEIGVPGEG
DRAEIMKIHT RGMPLAPDVN VDDLAQQTFG FVGADLAALA REAAIRALRR YLPDIDLEVD
EIPEDILDRL EVQSRDFRAA HRDVGPSAMR EVMLEVSHVT WADVGGLEAA KQEVREAVEY
PLTDRTRFEV LGIEPPKGVL LYGPPGTGKT LIAKAAAHES GANFIPVRGP QLLSKWVGES
ERAVREIFKK ARQVAPSLIF FDEMDALAPT RGGGSDSHVI ESVLNQILTE MDGLQELKDV
AVMGATNRPD IVDPALLRPG RFDRLVYIGE PGPDDRKMIL RIHTRLMPIE GSPMEDLVAD
IEGIGEQEME AAVNRLGKGR TFTLEEAKAV FAGIPRESKE KISSIDLRRR LVEHLVSRRL
VLQDPARDEL MATLSAQTEG FVGSDLEALC REAGMFALRE GATTLAPRHF TAAAAKVHAT
MNQRVRDYYQ KIQQFFKGGL PQEVQPPEYQ
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