| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0239 |
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| Symbol | |
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| ID | 7270625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 271665 |
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| End bp | 272408 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643568890 |
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| Product | MIP family channel protein |
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| Protein accession | YP_002465346 |
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| Protein GI | 219850914 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.507292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAC TGATGAAACG GTCCCTCGCC GAGATGGTCG GGACACTCCT GCTCGTCTAC
TTCGGGGCGG GGGCGGCGGC GGTCACGTTG ATGATCGCGC ACGGGGCCAC CCCCCCCAAC
AAGTTCAACA TCGGTATCGG GGCCCTCGGG GGTCTGGGTG ACTGGCTCGC AATAGGGCTG
GCCTTCGGAA TTGTGATCGC TGCAGTGATC TATGCCTTCG GCCGGATCTC AGGGGCCCAC
CTCAACCCAG CCGTCTCGAT CGCCCTCTGG GCGACGAAGC GGTTCCCGAC AGGTGATATG
GTCGCCTATA TCATCGCACA GCTGATCGGC GCCTCCGTCG GCAGCCTGCT CTTTGCAGCG
ACAGCCGGCA TGGACGCCGT TATGATCGGC GGGCTCGGGG CCACTGCCCC ATTCCCGGGG
ATCGGGATGG GTGCTGCGAT CCTGGCTGAA CTGCTCGGGA CGTTCGTGCT GATGCTGACG
ATCATGGGGG TCGCCGTCGA CAAGCGGGCG CCTGAAGGGT TCGCCGGGCT GATCATCGGG
TTGACCGTGG CCGGGATGAT CACGACCATA GGGAACATTT CCGGTGCCTC CTTAAACCCG
GCACGAACCT TCGGGCCGTT CCTCGGCGAC CTGCTGCTCG GCGGCTCCAA CCTCTGGGCG
AACTACCCAA TCTATGTCAT CGGGCCGATT GCAGGGGCCC TGATCGCAGC GTTCCTGTAT
GATTACCTGA ATGCAGAAGA TTGA
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| Protein sequence | MPSLMKRSLA EMVGTLLLVY FGAGAAAVTL MIAHGATPPN KFNIGIGALG GLGDWLAIGL
AFGIVIAAVI YAFGRISGAH LNPAVSIALW ATKRFPTGDM VAYIIAQLIG ASVGSLLFAA
TAGMDAVMIG GLGATAPFPG IGMGAAILAE LLGTFVLMLT IMGVAVDKRA PEGFAGLIIG
LTVAGMITTI GNISGASLNP ARTFGPFLGD LLLGGSNLWA NYPIYVIGPI AGALIAAFLY
DYLNAED
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