Gene Mpal_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0225 
Symbol 
ID7270610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp259301 
End bp261886 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content50% 
IMG OID643568877 
Productmagnesium-translocating P-type ATPase 
Protein accessionYP_002465334 
Protein GI219850902 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01524] magnesium-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACTG ACTCAAAAAA TGGTATACAA TCCGGTGCGA ACTTCCACAC CCTTCCGATT 
GAAGATCTGT ACTCAGCGCT CACTTCATCT GCAGAAGGAC TGACCACCGG GGAGGCCGAA
ACACAGAGGC TGCAGTATGG ACGAAATGAT ATCTCAGGTA AGAAAAAGCA TTCAGCACTT
CTCCAGTTTT TAGAACAATT CACCAATCCT CTTGTTCTCA TCCTGCTGTT TGCCGCTCTG
ATCTCAATAA CGGTTGGCGA GGTCACCAAT GCGGTGATCA TCATCAGTAT TATTCTGATC
AGTGTCGTTC TCGATTTTTT CCAGAGATAC AAGGCAGAAA ATGCTGCAGC GTTGCTGATA
AAAAAGATCA TCACTCAGGC AAGTGTGCAG AGGGATGGAG AAGAGCAGGA GATCCCCATT
GGCGACCTGG TCCCTGGTGA CCTCATCTCA CTCACAGCAG GGGATATGAT CCCTGCCGAT
GCCAGGTTGC TCACTGCACG AGATTTTTTT GTCAATGAAT CGTCACTGAC CGGTGAACCG
TACCCCGTCT CCAAGAGTGA AACACTTCAG GATCCAGGAA AACCTCTGGC CCAGGCAGAT
AATTATGTAT TTCTCGGGAC CTCGGTCATT AGCGGAACTG CACGGGCCAT CATTACCAAA
ACCGGACTTT CCACAGAATA CGGAAAGATA GCGAAGACGC TGGTTGAGCG ACCTCCTGAG
ACTGATTTTG AGCACGGGCT CAAACAGTTC AGTTACCTGA TGTCAAAGTT TGTCTTCAGC
CTCGTCATCC TGGTATTCTT TGTCAATGCA CTCTTCAAGC AGGACATCCT TCAGTCACTT
CTCTTCTCGG TGGCCCTTGC CGTCGGCATG ACACCCGAAC TTCTCCCGAT GATCCTGTCC
TTGAATATGA CAAAGGGAGC CATTGCCATG TCGACGAAGG GGGCCATCGT CAAGCACCCG
GAATCGATCC AGAACTTCGG AAGCATGGAT GTGCTCTGTA CCGATAAAAC GGGTACGTTG
ACGGATAATA AGATCGCCCT CATGAAACAT CTGGACACCG GGGGAAATGA CAGTGAAAAG
GTTCTGCTCT TCTCGTATAT CAACAGTTAT TTCCATACTG GTCTGAAGAA TACCCTCGAC
GAGGCGATCA TCGCCTTTCA ACCAGAAGAT CTCGGAACAT ATCGGAAGAT TGATGAGATT
CCCTTCGATT TCATTCGCCG GCGAACATCA GTGGTGGTAT CCGGAGCATC AGGTCACCTG
CTGATCACAA AAGGGGCACC AGAGGAGACC ATGGCGATAT GCACCTCTGT GGAAAAGAAC
GGTATCGTCA CCAGGTTGAC CGATGCCGAT CGGGAACAGA TTCTTGGGTT ATATAATAAT
CAGAGCAGGG AAGGGTTCCG GACACTTGCT GTATGCTACC GCACCATGAC AGTGGATCAG
AGCCGGTATT CAGCCGGCGA TGAGCAGGAG ATGACCATGT TAGGGCTCGT CACCTTCATC
GATCCCCCAA AGGAGAGTGC AAAGGAATCG GTGAAGTTAT TGGCCGCATC AGGCATAGAA
TTGAAGATTC TTACCGGCGA CGACGAACTC GTCACCCAGA AGACCTGTGA ACTGATCGGC
CTGGCGGTCA AGGGTGTGCT CTCGGGCAAT CAGATAGAAG ATATGGATCA GGAGACCCTC
TCCCGAGTGG TGGGGAATAT TACGATCTTC TCCCGAATGA CCCCGGTTCA GAAGAACCGT
GTCATGAACT CCCTGAAACG AAATGGCCAT GTCGTCGGTT TCATGGGTGA CGGTATCAAC
GACGCCCCGT CGATCCGGGA GGCGGACGTC GGGATCTCGG TTGAGAACGC GGTGGACATC
GCAAAGGAAT CAGCAGACAT CATTCTCCTC AAGAATGATC TCCGAGTCCT GCACGAGGGA
GTGCTGGAAG GAAGGAAGAC ATTCAGCAAT ACGATGAAGT ATATCCTGAT GGGCACGAGT
TCGAACTTCG GGAATATGTT CAGCGTGGCC GGGGCATCAT TCTTCCTCGG GTTCCTCCCC
ATGCTCCCTA TTCAGATTCT GCTCAATAAT CTCCTCTATG ACATATCGGA ATCCACCATT
CCAACCGACA ATGTCGATGA ATCCTATCTC GGTACACCGA AGAAATGGGA CATTGAATTT
ATTAAAAAAT TTATCTTTGC CTTCGGCCCG ATCAGTTCCA TCTTCGACTT CATCACGTTC
TTTATCCTGC TCTTCATCTT CAAAGCTGAT GCAGCACTCT TTCAGACCGC ATGGTTTATC
GAATCGATCT GCACCCAGAC TCTGATCATT TTTGTGATCA GGACCAGGAT CGTTCCTTTC
TATAAGAGCA GACCGAGTAT GCTTCTCCTT GCGAGCACCC TGGTGATCGT GGCCATCGCC
TGTATCCTCC CCTTTACCGT CATAGGAACG CTCTTTGGTT TCGTCCATCC TCCTGTGTCG
TTCTTTGCAG TACTTGCCGG ACTGGTCATC GGATATCTCA TCCTTGTTGA ACTGACGAAG
AAGTGGTTCT ACAGGAGATA TTCTCTCTTC ATTGAGAGAA AGAGAGAGAT GCCCAATTCC
CATTAA
 
Protein sequence
MGTDSKNGIQ SGANFHTLPI EDLYSALTSS AEGLTTGEAE TQRLQYGRND ISGKKKHSAL 
LQFLEQFTNP LVLILLFAAL ISITVGEVTN AVIIISIILI SVVLDFFQRY KAENAAALLI
KKIITQASVQ RDGEEQEIPI GDLVPGDLIS LTAGDMIPAD ARLLTARDFF VNESSLTGEP
YPVSKSETLQ DPGKPLAQAD NYVFLGTSVI SGTARAIITK TGLSTEYGKI AKTLVERPPE
TDFEHGLKQF SYLMSKFVFS LVILVFFVNA LFKQDILQSL LFSVALAVGM TPELLPMILS
LNMTKGAIAM STKGAIVKHP ESIQNFGSMD VLCTDKTGTL TDNKIALMKH LDTGGNDSEK
VLLFSYINSY FHTGLKNTLD EAIIAFQPED LGTYRKIDEI PFDFIRRRTS VVVSGASGHL
LITKGAPEET MAICTSVEKN GIVTRLTDAD REQILGLYNN QSREGFRTLA VCYRTMTVDQ
SRYSAGDEQE MTMLGLVTFI DPPKESAKES VKLLAASGIE LKILTGDDEL VTQKTCELIG
LAVKGVLSGN QIEDMDQETL SRVVGNITIF SRMTPVQKNR VMNSLKRNGH VVGFMGDGIN
DAPSIREADV GISVENAVDI AKESADIILL KNDLRVLHEG VLEGRKTFSN TMKYILMGTS
SNFGNMFSVA GASFFLGFLP MLPIQILLNN LLYDISESTI PTDNVDESYL GTPKKWDIEF
IKKFIFAFGP ISSIFDFITF FILLFIFKAD AALFQTAWFI ESICTQTLII FVIRTRIVPF
YKSRPSMLLL ASTLVIVAIA CILPFTVIGT LFGFVHPPVS FFAVLAGLVI GYLILVELTK
KWFYRRYSLF IERKREMPNS H