| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0224 |
|---|
| Symbol | |
|---|
| ID | 7270609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 258581 |
|---|
| End bp | 259225 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643568876 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465333 |
|---|
| Protein GI | 219850901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAG TACTACAACA GTATAAGAAA AGTCTGACCC TTCTGCTGAT CCTGATCCTT
GCCGGTCTGA TGATGATAGC TGGATGTACC TCATCGAACC CATCTCAGAC GACAACACCA
GTCACAACCA TGACCGCAGG GCAGTCCCCT ACAGCAGCAG TCGGAACGAC ACCAACAGCA
GCACAGAGCG GGACGTCCGG TCAGGCCGTG GACGTCAAAA CGCTGAACGC CCTCTTTCCC
CCGGCACCCG CCGGCTGGGT GACGGATCAG CAACCGGTGG GGTCGACCAG ACTGGACCAG
GATAACAATG CCTGGACATC ATCGGCGGCG ACATATGTCA GCACCACGAA CAAAGAGACA
ACGGCATCGG TCACGTACCA GGATACAGTT GGTCGACAGG TCGGTTACAA GAACATCTGG
AATAGTTTTA AAGATGCAGA GACCAGTGAC GGTTATTTTA AGAGTACTAC AATAAAGGGG
AACCCGGCAT GGGAGACACA CTCTATAGCA GGGAAGACCT TTGGCACCTG GGTCTCCGTG
AACGATCGAT TCATGGTGTA TGTATCCATC CAGAACGGCA CGAAAGCGGA CTATGATGCC
TTCATCAACG CCATCGATTT CGCCGGCATA GCGGCCCTGA AGTAA
|
|---|
| Protein sequence | MARVLQQYKK SLTLLLILIL AGLMMIAGCT SSNPSQTTTP VTTMTAGQSP TAAVGTTPTA
AQSGTSGQAV DVKTLNALFP PAPAGWVTDQ QPVGSTRLDQ DNNAWTSSAA TYVSTTNKET
TASVTYQDTV GRQVGYKNIW NSFKDAETSD GYFKSTTIKG NPAWETHSIA GKTFGTWVSV
NDRFMVYVSI QNGTKADYDA FINAIDFAGI AALK
|
|---|
| |