| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0195 |
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| Symbol | |
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| ID | 7270966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 225645 |
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| End bp | 226898 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643568848 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
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| Protein accession | YP_002465305 |
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| Protein GI | 219850873 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0550447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000288361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTAGCAA AAGGAGATAT GGTCTACGCC TGGACTAACG ATGCAGGCAT TGCTGACAAG
GCCGAATGTG GAGGGGCGGT TACCGGCCTC TGGAAGTTCG CGCTTGAGAA CAAGATCGTC
GATGCGGTCT TCACCGTGAA GAAGGGTGTG GATCTGTACG ATGCGGTCCC AACTCTGATC
ACCGACCCGG CTGACCTCGA AAAGACGGCA GGGTCCCTTC ACTGTGGTAC TCTCCTCCTT
CCGAAGTTGA TCAAGAAGTA CCTGGATGGT GCAAAGGACA AGAAGATCGG GGTCACTGTG
AAGGGCTGTG ATGCCATGGC CATGTACGAA CTGGCCAAGC GGAAACAGAT CAATATGGAT
AACATCCTGA TGATCGGGGT GAACTGTGGT GGTTCAGTCA ACCCAGGGGT CGCACGCGAG
ATGATCGAGA AGAAATACGG TGTCGACCCG AACGATGTCC ACAAGGAGGA GATCGACAAG
GGCCAGTTCA TCATCGAATA CGAAGGTGGC CATAAGGGGA TCACCGTCGA TGAACTTGAG
GAGGAGGGCT ACGGCCGCAG GACCAACTGC CGGCGGTGCA AGGCGAAGGT TCCACGTCAG
GCCGATCTCG CAGCAGGAAA CTGGGGTGTC ATCGGAGATA AGGCAGGCAA GGCGACCTTC
GTCGAGGTCT GCAGTGAGAA AGGTGCAGAA CTGCTCAATG CAGCCCAGAA AGCCGGTGTT
ATGAACGTGC AGGCGGCAGA ACCGAAGGGT ATCGCGATCC GTGGCAAGAT CGAAGGTGCC
ATGCTGAAGC TCGGTGACAA GTGGCGGGCC AAGGACTTTG GAAACCTCGG TACGGGAAAG
GAGCGGCTCG ATAAGATCCT GAAGGAGACG TCACGCTGCA TCAAGTGCTA CCAGTGCATC
GATCAGTGTC CGATATGTTA CTGTGTGGAA TGCTCCACCA AGAAGCCGGA ACTGGTCGCG
CCGGGAGTAC TGCCGGTGCC ATTCATGTTC CACTTGATCC GGTTCGCACA TATCGCCGAT
TCCTGTGTGA ACTGCGGCCA GTGCGAGGAG ATCTGCCCCA TGGAGATACC AAACTCCCTC
TTCATGCACG CTCAACAGGT CGAGCTCGAG GATCTCTTCG GTTACAAGCC AGGTGCAGAC
ATGTCCCTGC CTCTCCTTGC CCTCGTCGAC GAGAAGAGCG AACGAGCCAG ACTTGGTAAG
ACCGGCAGCG ATCAGATCTA TCTGAACGTC TTCACACCAG CAGATAAGGC CTGA
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| Protein sequence | MVAKGDMVYA WTNDAGIADK AECGGAVTGL WKFALENKIV DAVFTVKKGV DLYDAVPTLI
TDPADLEKTA GSLHCGTLLL PKLIKKYLDG AKDKKIGVTV KGCDAMAMYE LAKRKQINMD
NILMIGVNCG GSVNPGVARE MIEKKYGVDP NDVHKEEIDK GQFIIEYEGG HKGITVDELE
EEGYGRRTNC RRCKAKVPRQ ADLAAGNWGV IGDKAGKATF VEVCSEKGAE LLNAAQKAGV
MNVQAAEPKG IAIRGKIEGA MLKLGDKWRA KDFGNLGTGK ERLDKILKET SRCIKCYQCI
DQCPICYCVE CSTKKPELVA PGVLPVPFMF HLIRFAHIAD SCVNCGQCEE ICPMEIPNSL
FMHAQQVELE DLFGYKPGAD MSLPLLALVD EKSERARLGK TGSDQIYLNV FTPADKA
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