Gene Mpal_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0193 
Symbol 
ID7270964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp223339 
End bp224028 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content56% 
IMG OID643568846 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_002465303 
Protein GI219850871 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00375189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000266905 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTTTTC CCAACGGTGA ACGCCACCTC CGGCTCCGGG GATTCTTCTT CGGCCTTATC 
CCCATAATTC TCATGGGTGC TGTCCTCTTC ATTGGGGCAG GCACCTTCGC GTGGCTCGCA
GCGTGGGCGA TCCTCGGTGT CCTACTGGTA ACGACGGCTA TCATCTCCTT CACATGCAGC
ACAGATCTCA TCCAAGAACG CACGCTGGAG CAGGAAGGGG TAAAAGAGTA TGACAGAAAA
ATGCTCTGGC TCCTGAACCT TGTCGGGTTT CTGACGCTCT TCATTGCCGG CCTCGATCTT
CGGTTCGGTT GGACCGGGCA GATCAGTTTT TCTCTCCAGG TCGTGGGATT TATTCTGTTT
CTCCTTGGAT ACTGCCTCTT CTCTTGGGCG ATGCTCTCGA ATAGGTTCTT CTCGCGGATC
GTCCGGATAC AGGACGAAAA AGGGCATAAT CCCGTCACCA CCGGCCCTTA TCGCTTCGTG
AGGCATCCCA GTTACCTGGG ATTCATCGTC ATCGTACTTG TACAGCCAAT CGTTCTCGGC
TCTCTCTTGG CGTTGATCCC GGCCCTTGTC ACGGCAGCAG TGATCGTATG GCGGACCAGT
CTTGAGGACA GGACGCTGGT GCTCGAACTC AAAGGCTACG AAGCCTATGC GCGGCAGGTT
CGGTACCGGC TCGTCCCGGG GGTGTGGTGA
 
Protein sequence
MTFPNGERHL RLRGFFFGLI PIILMGAVLF IGAGTFAWLA AWAILGVLLV TTAIISFTCS 
TDLIQERTLE QEGVKEYDRK MLWLLNLVGF LTLFIAGLDL RFGWTGQISF SLQVVGFILF
LLGYCLFSWA MLSNRFFSRI VRIQDEKGHN PVTTGPYRFV RHPSYLGFIV IVLVQPIVLG
SLLALIPALV TAAVIVWRTS LEDRTLVLEL KGYEAYARQV RYRLVPGVW