| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0191 |
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| Symbol | |
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| ID | 7270962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 220756 |
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| End bp | 221487 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643568844 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_002465301 |
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| Protein GI | 219850869 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00113557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000257741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACTAAGA TTGTATCAGA ATATCGGGAA GAAGCCAGAA AAAAAATATT ACTGGCAGGT
CTGGAGGTGC TTTATGAGAA AGGCTATTGC AATACAACAA TGGATGAGAT CGCCCGGAGA
CTTGGTGTTA CAAAACCAGC TTTATATAGA TATTTTAAAA CAAAGGATGA GTTGATCATT
GAAAGTGCAA AGGAGAATCA TACAAAATTC CATAGCATGA TCTATGAACC TGACCATGAG
AATTGCCCAT TGGATGCATG GTTATCAATC TTCGAGATGG TCATTGTTCC CGATCCCTGT
GTTCAATCCC TATACTTCGA CATCATCTCG ATGACCTATC GCAAGGAAGA GTTCAGAGCC
TTCTCCATCC AGAGGATGGA AGAGGAGATC ATTAAAACAG CTCGAAAAAT TACAGATTGG
CAGGAGAAAG GTCTAATCGA TTCTGATATT GATCCACGGA GACTCTCGAT CGCAGTGATT
GCACTCTTTA ATGGAATGAG GTTGCAGATC ATGCTTGGTG TAAAAAGAGA GGAATTGTTT
GCTGCATGGA TAGAAAACCT CAAAATGTTG TTTGGTTTTC CGGTTCATGA GAAAAAACCG
ACTGTGTGCT CCTCTTCATG CAAATGGTTC AATCATTGCC AGCGGCCTCC CACTCACAAA
TTGCAGAACA GTGATATCAG TATTCGCAAT AATCATATAA ATCCTACCAA TCCCTTCGAT
CACAGATTTT AG
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| Protein sequence | MTKIVSEYRE EARKKILLAG LEVLYEKGYC NTTMDEIARR LGVTKPALYR YFKTKDELII
ESAKENHTKF HSMIYEPDHE NCPLDAWLSI FEMVIVPDPC VQSLYFDIIS MTYRKEEFRA
FSIQRMEEEI IKTARKITDW QEKGLIDSDI DPRRLSIAVI ALFNGMRLQI MLGVKREELF
AAWIENLKML FGFPVHEKKP TVCSSSCKWF NHCQRPPTHK LQNSDISIRN NHINPTNPFD
HRF
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