| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0183 |
|---|
| Symbol | |
|---|
| ID | 7270954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 212561 |
|---|
| End bp | 213370 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643568838 |
|---|
| Product | regulatory protein Crp |
|---|
| Protein accession | YP_002465295 |
|---|
| Protein GI | 219850863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1497] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.422757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.155154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGGAAC CAGATAACGT CCGGTCAACC ACTATTTTAC GGTCCAAGCG TGAGGTCACA
CGCTTTCAGA TCCTGGTCGA GGTCGCCGAA CATCAGCCGG CGGTCAGACA GCTCGAGATC
GCCGAGAAAC TCGGGGTGAC CCCACAGGCG GTATCAGAGT ATATTCGCGA ACTGGTCGAG
GACGGGATGG TCAGCGCCTA TGGCCGGGGA CGGTACGAGG TGACTCGGAC CGGCATCGAG
TGGGTGCTGA ACAATGCCGA GGAACTTGAG ACCTATGCTC GGCATATCAG GCGGGACCTG
ATCCAGCAGG TCTCGGTCTG GACTGCGATC GCCGACGCCA ATCTCCACAA AGGTGAAGTG
GTCGGTGTGT ACATGAAGGA CGGGTGGCTG TATGCTGGCA GAGGGGATCA GTCTGCAAGT
GGGCAGGTGA TCGAGGAGAC TGTCACTGGC GAGGATGTCG GGGTGACCCG GCTGAATGGA
ATCATCGACC ACCATGAAGG AGTGATCCAT GTCTGCAAGG TTCCCAGGAT CCAGCGGGGG
GGCTCCCGCA TGGTCAATCC CGATGCCCTG CAGGAGGTGC TCGAGGGTGT CAAGGTCGTT
GCAGCAGTCG GACTGGAGGC ATATATCGCC CTGAAGACCA GAGGTCGAAC GGCGGACATG
TTCTTTGGCG CCCGCGAAGG GGTGATCGAG GCGGCATTCC ATGGTCTGGA CTGCGCGATG
TTCATCGTCG ACGAGGAGTT CACCGAATTT CTTAAGAGGC TGGAGGACGT CGGGCTGACC
TACAGGATCC ATGATCTGAT CAGAGCATGA
|
|---|
| Protein sequence | MTEPDNVRST TILRSKREVT RFQILVEVAE HQPAVRQLEI AEKLGVTPQA VSEYIRELVE
DGMVSAYGRG RYEVTRTGIE WVLNNAEELE TYARHIRRDL IQQVSVWTAI ADANLHKGEV
VGVYMKDGWL YAGRGDQSAS GQVIEETVTG EDVGVTRLNG IIDHHEGVIH VCKVPRIQRG
GSRMVNPDAL QEVLEGVKVV AAVGLEAYIA LKTRGRTADM FFGAREGVIE AAFHGLDCAM
FIVDEEFTEF LKRLEDVGLT YRIHDLIRA
|
|---|
| |