| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0181 |
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| Symbol | |
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| ID | 7270952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 209756 |
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| End bp | 212008 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643568836 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002465293 |
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| Protein GI | 219850861 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.542448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.19292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGAAG ACTGCGGGAC CATCAGGGTA CGGGGAATCG TGCAGGGTGT CGGCTTCCGC
CCGTATGTCT ACGCCGCGGC GGTCGCGCTT AATATCAGAG GAACCGTCAA AAATATCGGC
AGTGAAGTCG AGATTCTGGC AATAGGTGAC CATTTTGACC AGTTCGTCGC TGCCATCAGA
CATGGACCGA CACGGGCAGT GATCGACAGT GTCACCGTCA CTCCACTGAT CGGGCCAGCC
CCTTTCAACA ATTTTTCGAT CCTTACGAGC AGCGAGGGCG CGCGCTCCGG GATGATCCCA
CCTGACATTG CGATCTGTGA CGAATGCCTC GCCGACATCA CGAACCCGGA GAGCCGATAT
TATCGATACT GGGCCACCTC ATGCGTGAAC TGCGGGCCGC GGTACAGCAT CCTCGACCAG
CTCCCCTATG ACCGGCAGCG GACCACGATG GACACGTTCC CGGTCTGCGA GGACTGCAGA
GCCGAGTACT CCAACCCGGC CTCCCGCCGA CATCACGCCC AGACGATCGC CTGTCCAACG
TGTGGCCCCG GCGTCAGGCT GTACGACAGG AACGGCGATG AGATCGGTGA GGAGGAGCCG
ATCGACGAGG CCGCCGCCAG GCTTGCAGCA GGAGAGATCG TCGCCCTGAA GGGGATCGGA
GGATTCCACA TCGCCTGCAC CGAGGCAGCT GCACCCCAAT TAAAGGAGCG GCTCGGACGA
ACCAAACAAC CGTTTGCCGT GATGGTAACC CCAGCCCGCG CCGATCGGAT CGCGCAGATC
AACGAGGGTG AGCAGCAGGC ACTGACCGGG ATCGAACACC CGATCGTGGT GCTGGTGAAA
CGCGACAGAA ATGCCCTGAA GGGGATCTCC AATCTCCATA CGATCGGATG TATGCTCCCG
TACACCGGCC TCCATCACCT CCTCTTCTCC GCCCTCGCAG ACCATGCAAC CGACCTGCTG
GTGATGACCA GCGCAAACAT GCCCGGATAT CCGATGATCA CCGATCTCTC AGAGGCGGTC
ACCCATCTCT CCGGGGTCGC TGACTGCTTC CTCTCCCATG ACCGGAGGAT CGTGAACCGG
TGCGACGACT CGGTGATCAG GGACGGGTAC CTGATCAGAC TCTCGCGGGG GTATGCACCG
CTGCGAACTA GGATCCCGCT CGGCGATCGA TGTATCCTTG GGGTCGGGGC CGAGCTGAAC
GTGAACGCGA CGATCTACCG GGATGGGTTC GCAATCACCT CCCCCCATAT CGGGAACGTC
AGAAACCCAA AGACCCTGCA GTACCTGGAG CAGACCATCG AGACCCTGGG CGGGCTGCTC
GGGGCAGAGT ACGATCTGAT CGTCCATGAC CTCCACCCCC GGTTCCTCTC GACCAGGTTC
GCCGAACGGC TCGGAGACGA ACTCGGAGCC GAGGTGATCG CCGTCCAGCA CCACCGGGCC
CATATCGCGG CCACCACCCA GGAGCCCTGC GTCGGAATCG CCATCGACGG GGTCGGGTAC
GGGGACGACC GGACGATCTG GGGCGGCGAG ATCTTTGCCG GCGAGACCCT GCATCTGGAT
AGGGTCGGTC ACCTGGAGTC GGTGTCGATG CCGGGCGGGG ACCTGGCCAC CCGGTTCCCG
GAACGGATGC TCTACGGGCT GCTGCCGGAC GACACAGTCC TTGACCTGCT CGACGAACGG
GGTTGGTCAG AGGTCGAGCG CAGAGCCCTG CAGCAGCAGG TGGCAAAGCA GATCAACACC
CCGCTCACCT CCTCCACCGG CCGGGTGCTG GATGCGATGG CTGCGCTCCT CGGGATCTGC
AGGGAACGGA CCTATGATGG CGAGCCGGCG ATGGTCCTCG AATCGGTGGC AGCCGAGGGG
ACTCCGCATT CCTGGGATCT CGAGTATCGG ACGGAAGACG GGGCTGAAGT CCTCTCCACG
AGGGCACTGG TCAGGAAGGC TTTCAATGAG TACCGAAGCC TCGACCGGCC AGGGACGAGG
AGCGGGCAGC AGCAGCGGGC TGACCTGGCG GCCTCGATCC AGTTCAACCT GGCCAGGGGA
ATCGCCGGGA TGGCAGTCAG GGCTGCAGAC GAACAGGGAC TTTCGGTGGT GGCCCTCAGC
GGCGGGGTCG CAATCAATGC GATGATCCGC GAGACGATCC ATACCATCGT CTGCAAGCAT
GGGCTGACCT TCCGAATGAA TGATCGCTAC CCGCCCGGAG ACGGCTGCGT CTCGTTCGGG
CAGGTTGTGT ACGGCGGAAA GAAGATGGAC TGA
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| Protein sequence | MSEDCGTIRV RGIVQGVGFR PYVYAAAVAL NIRGTVKNIG SEVEILAIGD HFDQFVAAIR
HGPTRAVIDS VTVTPLIGPA PFNNFSILTS SEGARSGMIP PDIAICDECL ADITNPESRY
YRYWATSCVN CGPRYSILDQ LPYDRQRTTM DTFPVCEDCR AEYSNPASRR HHAQTIACPT
CGPGVRLYDR NGDEIGEEEP IDEAAARLAA GEIVALKGIG GFHIACTEAA APQLKERLGR
TKQPFAVMVT PARADRIAQI NEGEQQALTG IEHPIVVLVK RDRNALKGIS NLHTIGCMLP
YTGLHHLLFS ALADHATDLL VMTSANMPGY PMITDLSEAV THLSGVADCF LSHDRRIVNR
CDDSVIRDGY LIRLSRGYAP LRTRIPLGDR CILGVGAELN VNATIYRDGF AITSPHIGNV
RNPKTLQYLE QTIETLGGLL GAEYDLIVHD LHPRFLSTRF AERLGDELGA EVIAVQHHRA
HIAATTQEPC VGIAIDGVGY GDDRTIWGGE IFAGETLHLD RVGHLESVSM PGGDLATRFP
ERMLYGLLPD DTVLDLLDER GWSEVERRAL QQQVAKQINT PLTSSTGRVL DAMAALLGIC
RERTYDGEPA MVLESVAAEG TPHSWDLEYR TEDGAEVLST RALVRKAFNE YRSLDRPGTR
SGQQQRADLA ASIQFNLARG IAGMAVRAAD EQGLSVVALS GGVAINAMIR ETIHTIVCKH
GLTFRMNDRY PPGDGCVSFG QVVYGGKKMD
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