Gene Mpal_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0172 
Symbol 
ID7270943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp200340 
End bp200918 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID643568830 
ProductPhosphoribosylanthranilate isomerase 
Protein accessionYP_002465287 
Protein GI219850855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.500611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA AGATCTGCGG GCTGACACGC CCAGAGGACG CCCGGTGTGC TGCAGAGGCC 
GGGGCAGACG CGGTCGGAGT CGTGATGTGC AGCCCCAGCT CGAAGCGATC GATCGACAGA
GAACAGGCAA AGGCGGTCTT CTCGGCTGCC GGGCCGGGGG TGGTCCACGT AGTCGTGACG
CACACCGACT CGCCCGAAGA CCTGGCAGCG ATCCTCGCCA TCGGCCCTGA CGCGGTGCAG
ATCTCAGCCG ACCTCACGGT CCCCCCCAAC GCCGGCGTAA AGGTGATCCG GGTGATCGGG
CCGGGGATGC CGCTACAGAA TGACTGCGAC GCCCTGATCG TCGACACCTC GATGGGGAGG
GGGATGCCCT TCGACCCGGC GGTCGCAGCC AACGCCGTCG CCCACGCGAC CGTTCCGGTG
ATCCTCGCCG GCGGGCTGCA TCCAGGGAAT GTTCGGGAGG CGATCGATAG CATAAACCCA
TATATGGTTG ATGTGGCCAG CGGAGTCGAG ATTGCGCCCG GAATCAAGGA CCCGGAACTG
ATCCGTGCAT TCGTGCGGGA AGCGAAGAAG GGCCAGTAG
 
Protein sequence
MKVKICGLTR PEDARCAAEA GADAVGVVMC SPSSKRSIDR EQAKAVFSAA GPGVVHVVVT 
HTDSPEDLAA ILAIGPDAVQ ISADLTVPPN AGVKVIRVIG PGMPLQNDCD ALIVDTSMGR
GMPFDPAVAA NAVAHATVPV ILAGGLHPGN VREAIDSINP YMVDVASGVE IAPGIKDPEL
IRAFVREAKK GQ