| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0165 |
|---|
| Symbol | rpl12p |
|---|
| ID | 7270936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 192461 |
|---|
| End bp | 192769 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643568824 |
|---|
| Product | 50S ribosomal protein L12P |
|---|
| Protein accession | YP_002465281 |
|---|
| Protein GI | 219850849 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2058] Ribosomal protein L12E/L44/L45/RPP1/RPP2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0552714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.589504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATA TCTATGCTGC ACTCCTGCTT CACAAGGCAG GCAAGGACGT AAGTGAAGAG
AACGTAAAGG CAGTCCTGAC TGCCGCCGGC ATCGCTGCCG ACGAGTCCCG GATCAAGGCG
CTGGTCGCCT CGCTCGAGGG TGTCGACATC GAGGATGCCA TCTCCAAGGC AGCCGCAGCT
CCAGTCGCTG TTGCAGCCGC ACCGGCAGCA GCCGGCGCAG CACCTGCAGC CGCAGAAGAG
GAGCCGGAAG AGGACAAGAA GGAAGAGGAA GAGAGCGGAA TGGCAGGGCT CGGTGCCCTG
TTCGGGTAA
|
|---|
| Protein sequence | MEYIYAALLL HKAGKDVSEE NVKAVLTAAG IAADESRIKA LVASLEGVDI EDAISKAAAA
PVAVAAAPAA AGAAPAAAEE EPEEDKKEEE ESGMAGLGAL FG
|
|---|
| |