| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0160 |
|---|
| Symbol | |
|---|
| ID | 7270931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 189598 |
|---|
| End bp | 189804 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643568819 |
|---|
| Product | protein translocase SEC61 complex, gamma subunit |
|---|
| Protein accession | YP_002465276 |
|---|
| Protein GI | 219850844 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2443] Preprotein translocase subunit Sss1 |
|---|
| TIGRFAM ID | [TIGR00327] protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.608101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA ATATCAAGGA TGTCAATATC AAGGCCCTCA ATATCAACGA GGAGCTCTTC
AGAAAGTACT GGCGTGTGCT CAAACTCGCC AGAACCCCCT CGCGTGAGGA GTTCATTAAG
ATCGCCATCG TCGCGGCAGC GGGTGTCGTG ATTATTGGAC TGATCGGGTT TATCATCTAC
GAATTGATGC TGGTGTTGCC ACAGTGA
|
|---|
| Protein sequence | MDLNIKDVNI KALNINEELF RKYWRVLKLA RTPSREEFIK IAIVAAAGVV IIGLIGFIIY
ELMLVLPQ
|
|---|
| |