| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0157 |
|---|
| Symbol | |
|---|
| ID | 7270928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 185757 |
|---|
| End bp | 187193 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643568816 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002465273 |
|---|
| Protein GI | 219850841 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.260977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTC ACACCCATCG TCGCCGCAGT CCCCGGTCCC GGGGGCCAAT TGATGATGGT
TCAGTCTCCG AGCTTTATCT CTTTGATCAG GCGCCAGCGG CGATGCTGAT CGTCGATCTC
CTGAACTGGA GGATCGCCCG GGCCAACCGG GCTGCAGCTG TCCTGCTCGG GTACACCAGC
GATCATCTCG CCGGCATGCG GGCAGGTCTT CTCTTCACCG TCGATACTAC CCAGCTCAAG
CGGTTGCTGG CCGGCACCGA CGGCAGTACA CGCGAGGTAT CGGTCATTCG GGGTGACGGT
ACCCCCGGTC TGCTCTGGCT CTCATCGACC AAGGTCACCC GGGTCGGATT GAATGAGGCA
ATGGTCGCTC TGAACGCCCC GCTCTGTGAC CCCGGGTTCC GGCAGCAGCT CGACCTTGCA
GATTTCAAGG AGTTTGCCGC AGGGCTCCCT CAGGGGGTCT ATGAGATGGA CACCCGGTTC
ATCTTGACCT TTATCAATCG GGCGGCGCTG GTGATGTTCG GTCTCACTGT CGAGGATGTG
AACCAGGGAA TCTGCGTGGT AGATTGGTTG GTTCCTGAAC AGCGGGAGGA GGTTATCGCG
GTGCTGAGTG GGAGTCTTAA CGGGATCCGG ACCCCTCGAC ATGACTGGCT GGCCAGGCGG
AAGGACGGGT CCACCTTCCC GGTGATGATC TATGCGACGC CCATCGTGCA GCATGGTCGA
ATCGTCGGCA ACCGGGGGCT GGTGATCGAC ATCTCTGAAC TGAAGCAGTC ACAGGAGGCG
CTTGAGACGG CCAACCGGAA ACTGAACCTG CTCTCCCGTG TGACCAGGCA TGACATCCAG
AATCAGGTGA CCTCCCTGCT TGGCTACCTG ACCCTCGTCG AGGAGTCGGT CGGCGATCCG
GGGCAGATCA GTCACCTTAA AAAAGGGAGA ACCGCCGCAG AGGCGATCGG CAGGCAGATC
GCGTTCGCCA GGGATTATCA GGAGATCGGG GTGAACGCCC CTGAGTGGCA GCACCTCGGC
ACCGTCCTCG CCCGAGCCAG AACAGGATGG ACATCGGGGG ATGTTGCGAT CACCATCGAG
GACGCCGACC TGCAGGTCTA CGCAGATCCG ATGCTCGAGA AGATCTTCTC GAACCTGATC
GACAATGCGC TTAGATACGG AGGGTCGATC ACCAGGATCC GGTTCTCTGC CGCCGTCACT
GATGCCGGCT GCCAGATCCT CTGCGCTGAC GACGGCCAGG GGGTTCCGGA GGATCAGAAG
GAACTGATCT TTCTGGAAGG GGTTGGCCAT CACACCGGTT TCGGCCTCTT TCTTGCGCGC
GAGATCCTGC AGTTGACTGG GATCACCATC GCCGAGACTG GGACCTTTGG GGAAGGGGCC
GTCTTCACCA TCAGTGTACC TGATGGGGGA TACCGCACAA CAGTACAGGA ATTATGA
|
|---|
| Protein sequence | MFIHTHRRRS PRSRGPIDDG SVSELYLFDQ APAAMLIVDL LNWRIARANR AAAVLLGYTS
DHLAGMRAGL LFTVDTTQLK RLLAGTDGST REVSVIRGDG TPGLLWLSST KVTRVGLNEA
MVALNAPLCD PGFRQQLDLA DFKEFAAGLP QGVYEMDTRF ILTFINRAAL VMFGLTVEDV
NQGICVVDWL VPEQREEVIA VLSGSLNGIR TPRHDWLARR KDGSTFPVMI YATPIVQHGR
IVGNRGLVID ISELKQSQEA LETANRKLNL LSRVTRHDIQ NQVTSLLGYL TLVEESVGDP
GQISHLKKGR TAAEAIGRQI AFARDYQEIG VNAPEWQHLG TVLARARTGW TSGDVAITIE
DADLQVYADP MLEKIFSNLI DNALRYGGSI TRIRFSAAVT DAGCQILCAD DGQGVPEDQK
ELIFLEGVGH HTGFGLFLAR EILQLTGITI AETGTFGEGA VFTISVPDGG YRTTVQEL
|
|---|
| |