| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0112 |
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| Symbol | |
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| ID | 7272282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 132236 |
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| End bp | 133924 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643568769 |
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| Product | PHP domain protein |
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| Protein accession | YP_002465228 |
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| Protein GI | 219850796 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1796] DNA polymerase IV (family X) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTGTA CCAACAGGCA GGCGGCCGAT ACGATCCGGT TCATCAGCCA GCTGCTTGAG
ATCAGAGGAG AGGACCCGTT CCGGGTCAGG GCATTCCAAC GGGCTGCCAT GGCGATCGAA
GGGCTTGGGG AGCCGGTCTG TAGCATGGCG CCCGAACAGG TGCTGGCGGT CCCGGGGATC
GGGCCGCACA CCGCGGCCCA GATCAGGGAA CTCTGCGCCG GCGAAGAGAG CAGCCTGCTT
CAGGACCTGC AGCAGTCGAT CCCGGCTTCG GTGATCGCCC TCCTCGAACT GGATCAGGTG
GGGCCGAAGA CCGTCCACCG GCTCTGGCAT GAACTCGGGA TCTCGACGAT CGAAGACCTG
GAGAAGGCCG CCCTGGCCCA CCAGGTCAGC ACCCTGAAGG GGTTCGGGGC GAAGAAGGAG
GAGGAACTGG TGAAGGCGAT CGCACGCCAC CGGCGGTCGA CCGGGCGGAT GACCAGAGTT
GCTGCAGAGG CTGTGCTCAG AGAGGTGACG GCTCTGCTGG TTGAAGGGAC CTACACGATC
GCAGGATCGT ATCGGCGAGG GAGGGCCACG ATCGGGGATA TCGACATCGT CTCCACCGAA
GCGCCGGCCG AGGTGAACTC GCGGCTGGTC TCCCTGGCAG ACGAGGTGAT CGATCAGGGT
GAAAAGCGAA CCTCGATCCG GGTCATGGGG CAGCGGGTCG ATGTCAGGTT CTGTACCCCG
GACCAGTGCG GCCCGATGCT CCTCTACCTG ACCGGGTCGA AGGACTTCAA CATCAAACTC
CGCGAGATCG CACTCTCTGC CGGTTGGCGG CTGAACGAGT ACGGGGTCGA GGAGCGGACG
ACCGGTGCAC ACAGAACGGC GGCGACCGAG GAGGAGATCT TCTCGATGCT CGGAATGGAT
CCCGTTCCGC CGGAACTCAG GGAGGACCGG GGCGAGGTGG AGGCAGCCCG GGAACACACG
CTGCCCACCC TCGTGATGGC GGACGACCTC CAGGGAGATC TGCATGTTCA CTCCCGCTGG
TCTGACGGCT CGATGACGAT TGCTGAGCTG GCCACCGCCG GAGAGGAACG GGGGTATCAG
TACATCATCT GTTCTGACCA CTCGGCCTCA CTGGGGATCG CTCACGGTCT CTCTGCTGCA
GAGGTTAGAG ATCAGCAACA CGAGATCGAG ATGGTGAACC GCACTTCATC CTGCCAGGTG
CTGGCCGGGA TCGAGGTGGA CATCCTCTCC AACGGGTCGC TCGGCCTCCC CGACCGGACA
CTGCAGGACC TGGACCTGGT GGTAGCCTCG ATCCATTCCG GGTTTCATCA GGAGGAAGAC
CAGATAACCC GGCGGATCAT CGGTGCGATC GAGAACGAAC ATGTGGATAT CATCGGCCAT
CCGACCGGGC GGGTACTCGG GCAGCGGGAT CCGTACGCGG TCGACCTGCA CCGGGTGATC
GAGGCCGCCG CTCTCCACCG GACCGCCCTG GAGATCAATG CTTCCCCATT CAGGTTGGAC
ATGGACGACA CCGCAGTCAG AGAAGCCCGT GATGGGGGGA TCGTCATCTC TCTCGGCAGC
GATGCGCATG CGCGTTCTGA ACTGGAGAAC ATGTCCTACG GGCTTTTGAT GGCCCGCCGC
GGATGGTGCC GGCCGGCAGA CCTGCTGAAC ACCAGAGACC TTTCGTCGGT GCTGGAGTGG
GCCGCATGA
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| Protein sequence | MGCTNRQAAD TIRFISQLLE IRGEDPFRVR AFQRAAMAIE GLGEPVCSMA PEQVLAVPGI
GPHTAAQIRE LCAGEESSLL QDLQQSIPAS VIALLELDQV GPKTVHRLWH ELGISTIEDL
EKAALAHQVS TLKGFGAKKE EELVKAIARH RRSTGRMTRV AAEAVLREVT ALLVEGTYTI
AGSYRRGRAT IGDIDIVSTE APAEVNSRLV SLADEVIDQG EKRTSIRVMG QRVDVRFCTP
DQCGPMLLYL TGSKDFNIKL REIALSAGWR LNEYGVEERT TGAHRTAATE EEIFSMLGMD
PVPPELREDR GEVEAAREHT LPTLVMADDL QGDLHVHSRW SDGSMTIAEL ATAGEERGYQ
YIICSDHSAS LGIAHGLSAA EVRDQQHEIE MVNRTSSCQV LAGIEVDILS NGSLGLPDRT
LQDLDLVVAS IHSGFHQEED QITRRIIGAI ENEHVDIIGH PTGRVLGQRD PYAVDLHRVI
EAAALHRTAL EINASPFRLD MDDTAVREAR DGGIVISLGS DAHARSELEN MSYGLLMARR
GWCRPADLLN TRDLSSVLEW AA
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