| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0088 |
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| Symbol | |
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| ID | 7272258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 97793 |
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| End bp | 98620 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643568746 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002465205 |
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| Protein GI | 219850773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.124171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAGC GATCTCTGGC CATGGTCCTC CTGATCATGG CCTGCATCGC TCTCTCTGCA
GGGCCGGCGC TCGCAGATCA GGGCATTACA CTTCTGAACA GCACATCCAA CATCACAGCA
TCCGGCAGCA TGGATGCGAA CCAGACCGCC GCACAGGCGA ACGTTTCGCA GGGGAACGTG
ATGATGCTGA ACGTCTCCAC CAACCAGGAG GCCCAGCGCT GGTCCACCCT CGGTGCGAAC
CTCACGACCC AGGGCAACTA CACCGGGGCT GTGGAAGCCT ATCAGAAGGC GGTCAGCATC
GATCCCAACT CCTCGGTCAC CTGGTTCAAC CTGGGCAACA CCCAGAAGGC GGCAGGCCAG
CCTGAAGAGG CGCTGAAGTC GTACAACCGC TCCCTGACCC TCGACCCGAA GAACAAGCTG
ACCTGGTTCA ATCAGGCCAA CACCCTGGCT GTGAACCTCT CGCGGTACTC TGACGCCATC
GCCTCGTACG ACCAGGCCCT GGCCATCGAC GGCAACTACT CGAAGGCCTG GTTCAACCGG
GGCGTCACCC AGCAGACCCT CCTGCTGGAC AGCGATGCCG TCACCTCGTA CGACCATGTC
CTCGCCCTGA ACATGAACGA CTCAGTGGCC TGGAACAACC GGGGGCTGGC CCTGCAGAAC
CTCTCCCTCT ACAAGGAAGC AAACGAATCG TTTGTGAACG CGAGCCTGAC CGACCCGCGG
AGAACCGCAA CCACCCAGAC CACCACCCGG GGATCCCCGC TCCCCATCGC CGTACCGATC
CTGGCCCTCG TCCTTGCCGG CTGGTGCATT GCCGCCAGGC GAAGATAA
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| Protein sequence | MVQRSLAMVL LIMACIALSA GPALADQGIT LLNSTSNITA SGSMDANQTA AQANVSQGNV
MMLNVSTNQE AQRWSTLGAN LTTQGNYTGA VEAYQKAVSI DPNSSVTWFN LGNTQKAAGQ
PEEALKSYNR SLTLDPKNKL TWFNQANTLA VNLSRYSDAI ASYDQALAID GNYSKAWFNR
GVTQQTLLLD SDAVTSYDHV LALNMNDSVA WNNRGLALQN LSLYKEANES FVNASLTDPR
RTATTQTTTR GSPLPIAVPI LALVLAGWCI AARRR
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