| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0080 |
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| Symbol | |
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| ID | 7272250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 88512 |
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| End bp | 89123 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568738 |
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| Product | translation initiation factor IF-2 subunit beta |
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| Protein accession | YP_002465197 |
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| Protein GI | 219850765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
[COG3269] Predicted RNA-binding protein, contains TRAM domain |
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| TIGRFAM ID | [TIGR00311] translation initiation factor aIF-2, beta subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0971382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC CGTACGAGAC GCTCCTCAAG AAAGCGTACG AGCATGTTAC TGAGGTGAGT
GAGTCCTCAG AACGGTTCAC AATCCCCGAG GTGAAGTCCT ATATCGAGGG GAAGGCCACG
GTCTTTGAGA ACTTCCGCGA GATTGCGGAC ACGCTCCGGC GTGAGCCTGA ACACCTGATG
AAGTTCCTGG TCGGCGAACT CGGCACTGCC GGCAAGATCG ATGGGACCCG TGCGGTCTTC
AACGGCAAGT TCGACCCTGC GCAGTTCACT GCCGCCGTCA AGAGTTACTT CGATGACTAT
GTCCTCTGCA GTGAGTGCGG ACGTCCTGAC ACCCGGCTGG TTAAGGACGA CCGGATCCTG
CTCCTCCGCT GCGATGCCTG TGGTAGCCAC AGGCCGGTGA AGAAGCGGAA GGCCAGAAGC
GAGGACGCCA ACAAGGGGCT GGTCGAAGGG AAGATCATGG ATGTGATGAT CCAGTCGGTC
AGCAAGCGTG GTGACGGGGT TGCCCGTGAA GGGAAGTACA TCATGTATGT CCCAAAATCC
AAGCCCGGGC AGACCGTGAA GATAAAGATC ACCCGGATAT CGGGTTCGAT CGTCTTCACC
GAACGGGCCT GA
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| Protein sequence | MADPYETLLK KAYEHVTEVS ESSERFTIPE VKSYIEGKAT VFENFREIAD TLRREPEHLM
KFLVGELGTA GKIDGTRAVF NGKFDPAQFT AAVKSYFDDY VLCSECGRPD TRLVKDDRIL
LLRCDACGSH RPVKKRKARS EDANKGLVEG KIMDVMIQSV SKRGDGVARE GKYIMYVPKS
KPGQTVKIKI TRISGSIVFT ERA
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