| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0075 |
|---|
| Symbol | |
|---|
| ID | 7272244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 79164 |
|---|
| End bp | 80471 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643568732 |
|---|
| Product | putative ATP/GTP binding protein |
|---|
| Protein accession | YP_002465192 |
|---|
| Protein GI | 219850760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.858141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGT GGGACGATGA ACCAGGGACC GCTGTCAGTG AACAGGAACG GTCAAAGTGT
ATCACAATGA TCAATGCGCT CCGACGGGGG ACCGTCCCTG CGCTGGGGCT TTCCGAGCTG
GCAGTAGGGC TTGAGGCCGA GGAAGGGGTG ATCCGGCAGC AGCTCACCTA CGTGGCCGGC
GGTGGTGGAG ACCTGAAGTT TATTCGGGGG GATTACGGGG CTGGCAAGAC GTTTCTGATC
GCCCGTGCCC TCGAACTGGC CACTGAACAG GGGTTCGTGA CCGCCCATGT GGTGATCTCA
GCAGAGACCC CGCTCCACCG GTTGCGGAGT CTGTACCAGC GGATCTGTGC GAATATGCGC
CTCCCGACGG ACGGCCCGGC CTTAAAAACC CTGATCGACA CTTGGCTCTT CGGGATCGAG
GAACGGGTGA TCGCAGTCAG GGGAACAGAG ACCCCTGACG AGGTGCTGGA GGCCGAGACA
GTTCGGGCGA TCGAGGGGGC ACTGGCTGGA GTCAGCGCCG AGAACAGTGC CCTCGCAGCG
GCGGTCAGGA CCTACTACCT GGCCAACAAC AAAGCCGAGT ACCCGCTCGC TCAGGCCGCC
CTCGGCTGGA TCGCCGGCGA GCCGAATGTC GGCAGAACAT TCCGGCAGAA GGCCGGGATC
AAGGGGGATG TCGACGACTC GGTCGCCCTC TCGTTCCTCC GCGGACTGGT CTCCATCATC
TGCAGCGCCG GGTATGCCGG GCTGGCGGTG GCCTTCGACG AGGTCGAGAC GACGCAGGGT
CTCGTCCGGG CGCAGCGCGA GAAGGGATAC GGCAACCTCC GGCAGCTGGT CGACGGGCTG
GACCGGGGGG AGATGGAGCA CTGTTATCTC CTCTTCACCG GGACGCCGGC GTTCTTCGAG
GGGTCGCGGG GGATCCGGGC TCTCCCACCG CTGGCCGACC GGATCAGTCT ACCGGCCTCG
GACGGCTACC GGAACCCGCA TCAGGCCCAG ATCGTGCTGG TTCCGTTCGA TGCGCAGAAA
CTTGAGAAGG TGGCCATGCG GGTGGCTGAT ATCTATGCGG CTGCCTGCGG CCCGGTGGAC
CGGGAACGGA TCTCGCACCG GTTCATCCGG GGGATGATCC GGTCGATGAC TGCCAAGTTC
GGCGGCAGGG TCGACGTGAT CCCGCGGGTT TTCCTCCGCG AGTTTGTGGA CGTGCTCGAC
AAGTGCGCCC TGTACCCCGA GTACGACCCG GCGACGTCGT ACCAGGAGAG CCGGCTTCCC
GAGGACCTGC GCGAAGAGGA GCAGGCCTTC ATCAGCATGC AGTTCTGA
|
|---|
| Protein sequence | MSTWDDEPGT AVSEQERSKC ITMINALRRG TVPALGLSEL AVGLEAEEGV IRQQLTYVAG
GGGDLKFIRG DYGAGKTFLI ARALELATEQ GFVTAHVVIS AETPLHRLRS LYQRICANMR
LPTDGPALKT LIDTWLFGIE ERVIAVRGTE TPDEVLEAET VRAIEGALAG VSAENSALAA
AVRTYYLANN KAEYPLAQAA LGWIAGEPNV GRTFRQKAGI KGDVDDSVAL SFLRGLVSII
CSAGYAGLAV AFDEVETTQG LVRAQREKGY GNLRQLVDGL DRGEMEHCYL LFTGTPAFFE
GSRGIRALPP LADRISLPAS DGYRNPHQAQ IVLVPFDAQK LEKVAMRVAD IYAAACGPVD
RERISHRFIR GMIRSMTAKF GGRVDVIPRV FLREFVDVLD KCALYPEYDP ATSYQESRLP
EDLREEEQAF ISMQF
|
|---|
| |